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The map label for this gene is ybhE [C]

Identifier: 116515433

GI number: 116515433

Start: 1348438

End: 1349451

Strand: Direct

Name: ybhE [C]

Synonym: SPD_1333

Alternate gene names: 116515433

Gene position: 1348438-1349451 (Clockwise)

Preceding gene: 116516657

Following gene: 116516282

Centisome position: 65.9

GC content: 42.7

Gene sequence:

>1014_bases
ATGAAAGAAACTGTTTATTTTGGAACTTATACACGTCGTACTTCTCAAGGGATTTACAAGGCAGACTTTGATACAGAAAC
TGGTCAGCTTTCAAATCTAGAACTTTTTGCAGCTGAGCCAAGTCCAACCTACCTTGCCTTTGACCAGCACCAACATTTAT
ACACTGTTGGTAGCCAAGACGATAAGGGGGGAATTGCAGCCTATCAAACTGACGGGACTGTGTTAAATCATGTTGTTGAA
GAAGGAGCTCCCCACTGTTATGTTGCTGTCGATGAAAAGCGTGATTTGGTTTACGCAGCTAACTATCACAAGGGACAAGT
CCTTGTTTATAAACGCCAGGAAGATGGTAGTCTTCTACTTAGTGATATGGATCAACACAGTGGCCAAGGTCCACATGAAA
ATCAAGCTTCCCCCCATGTTCACTATACAGATTTAACACCTGACCACTATCTAGTGACCTGCGACTTGGGAACTGACCAA
GTCATCACCTATGACCTCGATCAAGAAGGAAAATTATCTAAGCTCTATACCTATCACAGCAAGCCAGGAGCAGGCTCACG
CCATATCATTTTCCATAACCACTATAAAATCGCTTATCTCATTTGTGAACTCAATAGTACTATCGAAGTTTTAATCTACG
ATGGCGTTGGCGAATTTGAACGTATGCAGGTCATTTCAACTTTACCGGAAGCTTACGAAGGCTTTAATGGAACCGCTGCT
ATTCATCTCTCTAAAGACGGTAAATACCTCTACGCTTCTAACCGTGGCCATGATTCTATCGCAGTATATACCATCCTTGC
GGACGGTAGCTTAGAGTTATTAGAAATCGTTCCAACGCATGGTCAGACTCCACGTGATTTTGATTTGACACCCGACCAAA
AATTTCTCATTGTTGTCCATCAAGACTCTGACAATGCAACTGTCTTTAAACGTAATTGTGACAATGGTCGTCTAGCAGAA
CTCTCCAACGACTTCCATGTTCCCGAAGCAGTCTGCATCCGTTTTGCTCCTTAA

Upstream 100 bases:

>100_bases
ACAAAATAACTCTTTTTTAAAGTGCTTACATCTAATTGGATATCTTTAATTTACTTGTTTTTGTGATATAATAGTCTTAT
CTTTACACAGAGGTATAGTA

Downstream 100 bases:

>100_bases
AACACCATAAAAAATGAACTTGGTATTTTCAAGTTCATTTTTTCTTATAGTCTATTTCCGACATTAATACGGTTAATAGC
ACGTTGCAAAGCAATCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFB [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQDDKGGIAAYQTDGTVLNHVVE
EGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLLSDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQ
VITYDLDQEGKLSKLYTYHSKPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFERMQVISTLPEAYEGFNGTAA
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVHQDSDNATVFKRNCDNGRLAE
LSNDFHVPEAVCIRFAP

Sequences:

>Translated_337_residues
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQDDKGGIAAYQTDGTVLNHVVE
EGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLLSDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQ
VITYDLDQEGKLSKLYTYHSKPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFERMQVISTLPEAYEGFNGTAA
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVHQDSDNATVFKRNCDNGRLAE
LSNDFHVPEAVCIRFAP
>Mature_337_residues
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQDDKGGIAAYQTDGTVLNHVVE
EGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLLSDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQ
VITYDLDQEGKLSKLYTYHSKPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFERMQVISTLPEAYEGFNGTAA
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVHQDSDNATVFKRNCDNGRLAE
LSNDFHVPEAVCIRFAP

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=333, Percent_Identity=28.2282282282282, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 37757; Mature: 37757

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQD
CCCEEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEECCCC
DKGGIAAYQTDGTVLNHVVEEGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLL
CCCCEEEEECCCHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEE
SDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQVITYDLDQEGKLSKLYTYHS
ECCHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEC
KPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFERMQVISTLPEAYEGFNGTAA
CCCCCCEEEEEECCEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEE
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVH
EEEECCCCEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEE
QDSDNATVFKRNCDNGRLAELSNDFHVPEAVCIRFAP
ECCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQD
CCCEEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEECCCC
DKGGIAAYQTDGTVLNHVVEEGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLL
CCCCEEEEECCCHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEE
SDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQVITYDLDQEGKLSKLYTYHS
ECCHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEC
KPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFERMQVISTLPEAYEGFNGTAA
CCCCCCEEEEEECCEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEE
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVH
EEEECCCCEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEE
QDSDNATVFKRNCDNGRLAELSNDFHVPEAVCIRFAP
ECCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9620952 [H]