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The map label for this gene is 116515314

Identifier: 116515314

GI number: 116515314

Start: 112225

End: 113088

Strand: Reverse

Name: 116515314

Synonym: SPD_0112

Alternate gene names: NA

Gene position: 113088-112225 (Counterclockwise)

Preceding gene: 116516160

Following gene: 116515849

Centisome position: 5.53

GC content: 37.73

Gene sequence:

>864_bases
ATGCGTTATGATTTCGGAAAGGTCTATAAAGAAATACGTGAGTCAAAGGGGCTGACCCAAGAAGAGGTCTGTGGGGGTGT
TCTCTCAAGAACCAGCTTATCAAAAATCGAAAGTGGCAAGACAACCCCAAAATATGAAAATATGGAATTTCTTCTCCGTC
AAATCAATATGAGTTTTGAAGAGTTTGAATATATCTGTCAACTTTATCAACCAAGTCAACGCACAGAGATTATGCAAACC
TATCTCAATATGCGTTCCATTATCGGGACCAGCGATCTTGTCAATTTATTTCAAAAATGCCAAGACTACCTCAAGACCCA
CCACGATCTCCCTATAGAAGAAATCAGAGATATGCTTGAAGTTGTTATTTATCTCCGTCAACACGGGGCAGGGGAACTAT
CAAAACACGCAGAACAGGTTGTCAAAAAACTTTGGAAAAAAATTGAAAAACAAGATACATGGTATGAGAGTGATCTAAAA
ATCCTCAATACCATTCTTTTCAGTTTTCCCATTGAATACCTCCATCTCATCACTGGAAAAATATTGCAACGCCTAGAAGT
CTATAAAAACTATCAACATTTATATGACTTGCGAATGACAATTCTATTAAACCTTTCCACACTCTATCTATACAATCAAG
ATAAAAACATGTGTAAGCAAATCTGCTACACTTTACTAGAGGACGCCAAGAATAAGAAAAGCTACGATAGGCTGGCTATC
TGCTATGTCCGTATTGGGATTTGTACAGACGATTCTAAACTTATCCAAAAAGGGTTCTCCCTTCTGGAGCTAACCGAGGA
AACTTCTATGCTGTCTCATCTCAAAAAAGAAGTAGAGATCTATTACCAAGCGAAGGAAAGATAA

Upstream 100 bases:

>100_bases
TTTATTTCGACTTTCTTTTTTACTTTTTACATTGCTATGATACAATATTTTTAACAAAATTTTATTGTTTGTTAACTTTT
TTCACGAAAAGGAGAAAATC

Downstream 100 bases:

>100_bases
AAAAGCCGAGGGATTTCCTCGACTCTTTACATATTATTTGTTCGTTAGTTCTTAATACCAGCCATTGTTAAGCCAGAAGT
TTTTAGCTCTGCCAAGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRYDFGKVYKEIRESKGLTQEEVCGGVLSRTSLSKIESGKTTPKYENMEFLLRQINMSFEEFEYICQLYQPSQRTEIMQT
YLNMRSIIGTSDLVNLFQKCQDYLKTHHDLPIEEIRDMLEVVIYLRQHGAGELSKHAEQVVKKLWKKIEKQDTWYESDLK
ILNTILFSFPIEYLHLITGKILQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAI
CYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER

Sequences:

>Translated_287_residues
MRYDFGKVYKEIRESKGLTQEEVCGGVLSRTSLSKIESGKTTPKYENMEFLLRQINMSFEEFEYICQLYQPSQRTEIMQT
YLNMRSIIGTSDLVNLFQKCQDYLKTHHDLPIEEIRDMLEVVIYLRQHGAGELSKHAEQVVKKLWKKIEKQDTWYESDLK
ILNTILFSFPIEYLHLITGKILQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAI
CYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER
>Mature_287_residues
MRYDFGKVYKEIRESKGLTQEEVCGGVLSRTSLSKIESGKTTPKYENMEFLLRQINMSFEEFEYICQLYQPSQRTEIMQT
YLNMRSIIGTSDLVNLFQKCQDYLKTHHDLPIEEIRDMLEVVIYLRQHGAGELSKHAEQVVKKLWKKIEKQDTWYESDLK
ILNTILFSFPIEYLHLITGKILQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAI
CYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34138; Mature: 34138

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA