| Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
|---|---|
| Accession | NC_008513 |
| Length | 416,380 |
Click here to switch to the map view.
The map label for this gene is groES
Identifier: 116514959
GI number: 116514959
Start: 10754
End: 11047
Strand: Direct
Name: groES
Synonym: BCc_010
Alternate gene names: 116514959
Gene position: 10754-11047 (Clockwise)
Preceding gene: 116514958
Following gene: 116514960
Centisome position: 2.58
GC content: 29.25
Gene sequence:
>294_bases ATGAAGCTTCGTCCATTGCATGATAGAGTAATTGTTAAACGCAATGAAGTAGAATTAAAATCTGCTGGAGGTATTGTTTT AACAGGTTCAGCAGCTGGAAAATCTACTCGTGGAGTTGTTTTATCAGTTGGTAAAGGTCGAATTTTAGATAATGGTAGTA TAAAAAAATTAGATGTAAAAGTTGGAGATATTGTTATTTTTAATGAAGGTTATGGAGCAAAAACAGAAACGATTAATAAT GAAGAAGTATTAATTCTTACAGAAAATGATATTTTAGCAATTGTTGAAAAATAA
Upstream 100 bases:
>100_bases TCCATATATTCTTAAAATATAAGAGTTGAATAAAATAAATTTCTCTTAGTAATTATTTAATAGATATTATTTAGATTTAA ATTGAAAAAAGGATTATTAT
Downstream 100 bases:
>100_bases AATTATATAAAAATTTATTTTTAATTATTTATTAAATACTGTGAGGATATTAACATGGCTGCAAAAGATGTGAAATTTGG TAATGAAGCTCGAATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: GroES protein; Protein Cpn10
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKLRPLHDRVIVKRNEVELKSAGGIVLTGSAAGKSTRGVVLSVGKGRILDNGSIKKLDVKVGDIVIFNEGYGAKTETINN EEVLILTENDILAIVEK
Sequences:
>Translated_97_residues MKLRPLHDRVIVKRNEVELKSAGGIVLTGSAAGKSTRGVVLSVGKGRILDNGSIKKLDVKVGDIVIFNEGYGAKTETINN EEVLILTENDILAIVEK >Mature_97_residues MKLRPLHDRVIVKRNEVELKSAGGIVLTGSAAGKSTRGVVLSVGKGRILDNGSIKKLDVKVGDIVIFNEGYGAKTETINN EEVLILTENDILAIVEK
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family
Homologues:
Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=79.1666666666667, Blast_Score=151, Evalue=9e-39,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): CH10_BUCCC (Q058F4)
Other databases:
- EMBL: CP000263 - RefSeq: YP_802588.1 - ProteinModelPortal: Q058F4 - SMR: Q058F4 - STRING: Q058F4 - EnsemblBacteria: EBBUCT00000001231 - GeneID: 4440650 - GenomeReviews: CP000263_GR - KEGG: bcc:BCc_010 - eggNOG: COG0234 - GeneTree: EBGT00050000007913 - HOGENOM: HBG703377 - OMA: SEKIDGE - BioCyc: BAPH372461:BCC_010-MONOMER - GO: GO:0005737 - HAMAP: MF_00580 - InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 - Gene3D: G3DSA:2.30.33.40 - PANTHER: PTHR10772 - PRINTS: PR00297 - SMART: SM00883
Pfam domain/function: PF00166 Cpn10; SSF50129 GroES_like
EC number: NA
Molecular weight: Translated: 10426; Mature: 10426
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRPLHDRVIVKRNEVELKSAGGIVLTGSAAGKSTRGVVLSVGKGRILDNGSIKKLDVK CCCCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCEEEECCCCEEEECCCEEEEEEE VGDIVIFNEGYGAKTETINNEEVLILTENDILAIVEK ECCEEEEECCCCCCCEEECCCEEEEEECCCEEEEEEC >Mature Secondary Structure MKLRPLHDRVIVKRNEVELKSAGGIVLTGSAAGKSTRGVVLSVGKGRILDNGSIKKLDVK CCCCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCEEEECCCCEEEECCCEEEEEEE VGDIVIFNEGYGAKTETINNEEVLILTENDILAIVEK ECCEEEEECCCCCCCEEECCCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA