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The map label for this gene is yqkD [H]

Identifier: 116496299

GI number: 116496299

Start: 2863529

End: 2864458

Strand: Direct

Name: yqkD [H]

Synonym: LSEI_2883

Alternate gene names: 116496299

Gene position: 2863529-2864458 (Clockwise)

Preceding gene: 116496295

Following gene: 116496305

Centisome position: 98.9

GC content: 49.78

Gene sequence:

>930_bases
ATGAAACAAAGCCATTTGATCGGCCTTGCAACCCCACTGTTATTATCGGCTGGCACGTTAGCGACCGCCGAAAGCTTTTA
TCAATATGCATTTCGCCGCATTAACTATATTCCAGACGCGCGGCGTTCGATGCAAAAGTATGCGGCTTCATATTATCGCC
ATGTCCACTGGGTAGAAAGTCAGGCCAATATTGAGGCATGGCATATGACAGCCCCGGATAATCAACGACTTGAAGCTCTT
TGGTTGCCGCATCCCGGCAGTAAAAAAGCGGTGATTGTGGGCCACGGTTACAAAGGTACTGGGATTACGATGAGCAACTT
TGCCCACATGTTTTACGATCTAGGCTTCAATGTCCTGCTACCGGATGATCGCGGGCATGGTGAATCGGATGGCCAATACA
TTAGTTTCGGCTGGCTGGATCGGCTGGATTATTTGGGTTGGCTGCAACGTATCATTGATCGAATCGGTGCAGACAGTCAA
CTGCTGTTGTTTGGTACCAGCATGGGTGGTGCCACAGTTTCGTTGGTGGCAGGCGAACCCAGTTTGCCCAAACAAGTGAA
GGCTGTCATTGAAGACTGCGGCTACACTGATGTTGAAACCGAATTGGCCTACTTACTGAAAAAGCAGTTTCACCTGCCAC
CAATGCCGTTGGTGCCACTGGCAAGTTTTCTTAACTATCGCCGGTTAGGTTATCCTTTACGCGTTGTCAACGTCCGCCAA
GCACTCACCCGCAACCATTTGCCACTATTGGTTATTCACGGTGCGGAAGATGTCTATGTGCCAACGAAAATGGGTCGGCA
AAATTATGCGGCTTCTGCGGGTCCTAAAGCCCTCTGGATCGTTCCGGGCGCTGCGCACGCGGAAAGCTACTGGATCAACC
CGGAAGCTTATCAGGCACACGTCAAACGTTTTCTAGATATCTTTTTCTAA

Upstream 100 bases:

>100_bases
AACATTTGCAGATTCATAAGCAGCGCTCCAGCAGGCGGCACCCCGGTCTCCGCCGTGCTTTGCCCTGACTGCAAGACTTG
GAAATGGGAGGCACTGAGTC

Downstream 100 bases:

>100_bases
CTGTTGCTTTGTAACCATCACAAAAATGGATCGTCTGAATGATCACCACCATTCAAACGGTCCATTTTAATGTCTAATCA
AAAACGCGCAGCACAGTCTA

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKQSHLIGLATPLLLSAGTLATAESFYQYAFRRINYIPDARRSMQKYAASYYRHVHWVESQANIEAWHMTAPDNQRLEAL
WLPHPGSKKAVIVGHGYKGTGITMSNFAHMFYDLGFNVLLPDDRGHGESDGQYISFGWLDRLDYLGWLQRIIDRIGADSQ
LLLFGTSMGGATVSLVAGEPSLPKQVKAVIEDCGYTDVETELAYLLKKQFHLPPMPLVPLASFLNYRRLGYPLRVVNVRQ
ALTRNHLPLLVIHGAEDVYVPTKMGRQNYAASAGPKALWIVPGAAHAESYWINPEAYQAHVKRFLDIFF

Sequences:

>Translated_309_residues
MKQSHLIGLATPLLLSAGTLATAESFYQYAFRRINYIPDARRSMQKYAASYYRHVHWVESQANIEAWHMTAPDNQRLEAL
WLPHPGSKKAVIVGHGYKGTGITMSNFAHMFYDLGFNVLLPDDRGHGESDGQYISFGWLDRLDYLGWLQRIIDRIGADSQ
LLLFGTSMGGATVSLVAGEPSLPKQVKAVIEDCGYTDVETELAYLLKKQFHLPPMPLVPLASFLNYRRLGYPLRVVNVRQ
ALTRNHLPLLVIHGAEDVYVPTKMGRQNYAASAGPKALWIVPGAAHAESYWINPEAYQAHVKRFLDIFF
>Mature_309_residues
MKQSHLIGLATPLLLSAGTLATAESFYQYAFRRINYIPDARRSMQKYAASYYRHVHWVESQANIEAWHMTAPDNQRLEAL
WLPHPGSKKAVIVGHGYKGTGITMSNFAHMFYDLGFNVLLPDDRGHGESDGQYISFGWLDRLDYLGWLQRIIDRIGADSQ
LLLFGTSMGGATVSLVAGEPSLPKQVKAVIEDCGYTDVETELAYLLKKQFHLPPMPLVPLASFLNYRRLGYPLRVVNVRQ
ALTRNHLPLLVIHGAEDVYVPTKMGRQNYAASAGPKALWIVPGAAHAESYWINPEAYQAHVKRFLDIFF

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 34790; Mature: 34790

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSHLIGLATPLLLSAGTLATAESFYQYAFRRINYIPDARRSMQKYAASYYRHVHWVES
CCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECC
QANIEAWHMTAPDNQRLEALWLPHPGSKKAVIVGHGYKGTGITMSNFAHMFYDLGFNVLL
CCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE
PDDRGHGESDGQYISFGWLDRLDYLGWLQRIIDRIGADSQLLLFGTSMGGATVSLVAGEP
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCC
SLPKQVKAVIEDCGYTDVETELAYLLKKQFHLPPMPLVPLASFLNYRRLGYPLRVVNVRQ
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHH
ALTRNHLPLLVIHGAEDVYVPTKMGRQNYAASAGPKALWIVPGAAHAESYWINPEAYQAH
HHHHCCCCEEEEECCCCEEECHHCCCCCCCCCCCCCEEEEECCCCCCCCEECCHHHHHHH
VKRFLDIFF
HHHHHHHCC
>Mature Secondary Structure
MKQSHLIGLATPLLLSAGTLATAESFYQYAFRRINYIPDARRSMQKYAASYYRHVHWVES
CCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECC
QANIEAWHMTAPDNQRLEALWLPHPGSKKAVIVGHGYKGTGITMSNFAHMFYDLGFNVLL
CCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE
PDDRGHGESDGQYISFGWLDRLDYLGWLQRIIDRIGADSQLLLFGTSMGGATVSLVAGEP
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCC
SLPKQVKAVIEDCGYTDVETELAYLLKKQFHLPPMPLVPLASFLNYRRLGYPLRVVNVRQ
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHH
ALTRNHLPLLVIHGAEDVYVPTKMGRQNYAASAGPKALWIVPGAAHAESYWINPEAYQAH
HHHHCCCCEEEEECCCCEEECHHCCCCCCCCCCCCCEEEEECCCCCCCCEECCHHHHHHH
VKRFLDIFF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]