Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is celA [H]

Identifier: 116496239

GI number: 116496239

Start: 2801448

End: 2801780

Strand: Direct

Name: celA [H]

Synonym: LSEI_2817

Alternate gene names: 116496239

Gene position: 2801448-2801780 (Clockwise)

Preceding gene: 116496234

Following gene: 116496240

Centisome position: 96.76

GC content: 44.74

Gene sequence:

>333_bases
ATGGCAGAGAAAAAGATTATGTTGGTCTGCGCCGCTGGTATGTCAACAAGTATGCTGGTTGCACGCATGCAAAAAGCCGC
CGAAAAAGATGGCGTTGAGGTCAATATTTTTGCAACCGCCGCTTCCGATGCAGACAACAAATTAGCTGAGGAAAAACCAG
ATGTTCTGATGTTAGGACCTCAAGTCCGCTATCTTGAAGGTCAATTCAAAAAGGATCTCGATATTCCGGTTGATGTGATT
AACATGCAGGATTACGGCTTGATGAACGGCGAAAAAGTCCTCAAGGCGTCCTTGAAGGCAATTGCAGATGGTAAACAAGG
AGAAGAAGCATAA

Upstream 100 bases:

>100_bases
AAGGTGTGGTTTTGAAAACGCTTGTAAAATTTGTACCTACGAATTATAATAGCACAAGAAACAGAAAACGATTACATTTT
TTTAAAAAGGAGCCGAAAAA

Downstream 100 bases:

>100_bases
TGAGTGAAGAAGATCAGAACCTCGAAACTGTCATGGGCTTGATCATGAATGGTGGCAACGCCAAGAGTTCTGCCTTTGAA
GCTATTCACGCAGCCAAAGC

Product: cellobiose-specific PTS system IIB component

Products: NA

Alternate protein names: EIIB-Cel; PTS system cellobiose-specific EIIB component [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGPQVRYLEGQFKKDLDIPVDVI
NMQDYGLMNGEKVLKASLKAIADGKQGEEA

Sequences:

>Translated_110_residues
MAEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGPQVRYLEGQFKKDLDIPVDVI
NMQDYGLMNGEKVLKASLKAIADGKQGEEA
>Mature_109_residues
AEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGPQVRYLEGQFKKDLDIPVDVIN
MQDYGLMNGEKVLKASLKAIADGKQGEEA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=95, Percent_Identity=42.1052631578947, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 11891; Mature: 11760

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGP
CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCCEEEECC
QVRYLEGQFKKDLDIPVDVINMQDYGLMNGEKVLKASLKAIADGKQGEEA
EEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGP
CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCCEEEECC
QVRYLEGQFKKDLDIPVDVINMQDYGLMNGEKVLKASLKAIADGKQGEEA
EEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407820 [H]