| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is celA [H]
Identifier: 116496239
GI number: 116496239
Start: 2801448
End: 2801780
Strand: Direct
Name: celA [H]
Synonym: LSEI_2817
Alternate gene names: 116496239
Gene position: 2801448-2801780 (Clockwise)
Preceding gene: 116496234
Following gene: 116496240
Centisome position: 96.76
GC content: 44.74
Gene sequence:
>333_bases ATGGCAGAGAAAAAGATTATGTTGGTCTGCGCCGCTGGTATGTCAACAAGTATGCTGGTTGCACGCATGCAAAAAGCCGC CGAAAAAGATGGCGTTGAGGTCAATATTTTTGCAACCGCCGCTTCCGATGCAGACAACAAATTAGCTGAGGAAAAACCAG ATGTTCTGATGTTAGGACCTCAAGTCCGCTATCTTGAAGGTCAATTCAAAAAGGATCTCGATATTCCGGTTGATGTGATT AACATGCAGGATTACGGCTTGATGAACGGCGAAAAAGTCCTCAAGGCGTCCTTGAAGGCAATTGCAGATGGTAAACAAGG AGAAGAAGCATAA
Upstream 100 bases:
>100_bases AAGGTGTGGTTTTGAAAACGCTTGTAAAATTTGTACCTACGAATTATAATAGCACAAGAAACAGAAAACGATTACATTTT TTTAAAAAGGAGCCGAAAAA
Downstream 100 bases:
>100_bases TGAGTGAAGAAGATCAGAACCTCGAAACTGTCATGGGCTTGATCATGAATGGTGGCAACGCCAAGAGTTCTGCCTTTGAA GCTATTCACGCAGCCAAAGC
Product: cellobiose-specific PTS system IIB component
Products: NA
Alternate protein names: EIIB-Cel; PTS system cellobiose-specific EIIB component [H]
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGPQVRYLEGQFKKDLDIPVDVI NMQDYGLMNGEKVLKASLKAIADGKQGEEA
Sequences:
>Translated_110_residues MAEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGPQVRYLEGQFKKDLDIPVDVI NMQDYGLMNGEKVLKASLKAIADGKQGEEA >Mature_109_residues AEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGPQVRYLEGQFKKDLDIPVDVIN MQDYGLMNGEKVLKASLKAIADGKQGEEA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788034, Length=95, Percent_Identity=42.1052631578947, Blast_Score=62, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014350 - InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 11891; Mature: 11760
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGP CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCCEEEECC QVRYLEGQFKKDLDIPVDVINMQDYGLMNGEKVLKASLKAIADGKQGEEA EEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AEKKIMLVCAAGMSTSMLVARMQKAAEKDGVEVNIFATAASDADNKLAEEKPDVLMLGP CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCCEEEECC QVRYLEGQFKKDLDIPVDVINMQDYGLMNGEKVLKASLKAIADGKQGEEA EEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407820 [H]