Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116496217

Identifier: 116496217

GI number: 116496217

Start: 2774318

End: 2775148

Strand: Direct

Name: 116496217

Synonym: LSEI_2795

Alternate gene names: NA

Gene position: 2774318-2775148 (Clockwise)

Preceding gene: 116496216

Following gene: 116496220

Centisome position: 95.82

GC content: 49.1

Gene sequence:

>831_bases
ATGAAGCGCAGGACGTTGTTTTCGATCATCGTCATCACGCTGACCGCAGGATTTTTTACCTTATTTTACGGTATGCATAG
TACTTGGACAGATACCCGGTCAGCGCAGGCCGTTCAAGCCGCTACCGACCAAGTCAATGATTTGTTCAAGGATCAATCGC
ATCAATTACCTTCAGACCAGCTAAATAAGCAGGCTATAGCAGCTGCCGAGACCAAATTACAACAGGCTCGTCAGAAGGCC
AATGATGCAGACCACGCTGCCGCACTTGCCAGCGCACAAGCCGATGTTGATGCCGCTAAACATATGCTGATTGTTAAAGA
TGCTGTCGCTCAAAATGCAACAAAACTGGATGAGCTAAAAACGTTGTCAGATGAGTCGCAGCAAGCATTAACTGAGCTTG
CCAAACAGAAACCGACATTTGTCCAAACCTATCAGGAACGGGTGGCACAACTGTCTGATCAAGAAGCGGCTGTCGCGAAA
ATCGCCAGTCTTTTTAGTGATACCGATTTTAAAACGCCTAAGCCAAATCTGAATTCGGCACAAGTACAGGCCGCATTAAC
TGCTGTTGAAGATTTGGACAATAAACAATTTGCCGCCCAAGTCATGCCGCTGATCAGTACTGCTCAAAATGCCACTTCCA
GCGATGACAGTCGTGACCCCGAACCGTCAGCATCATCAGCGCTGCCTAGTTCGGCCGACAGCAGCCCGTCAGCCGTTGCC
AGCAGCAGTGATCAAGCCAGTTCAGCAAATGCTAGCGGCAGTGAATCGGAGCAAAGTCAGGCATCCAGCTCAACCTCGAC
AGCAACTTCTTCATCTAGCCAGAATCCGTAA

Upstream 100 bases:

>100_bases
TCCTGATGTGATGATCAAATTTTAATCATCACATCAGGAGGTGTTGGCACCTTGTCTGCTAAAGATATTGGTTGACGCTC
GCTCTTAGGAGGAAGTATTT

Downstream 100 bases:

>100_bases
TTTTTTGGATCACTAACCGATACTCAGGCACGCGTTGTCTGTCAAAAAAATGACGATACCGCACACATGCAGACTTGTGC
GGATCGTCATTTTTTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKRRTLFSIIVITLTAGFFTLFYGMHSTWTDTRSAQAVQAATDQVNDLFKDQSHQLPSDQLNKQAIAAAETKLQQARQKA
NDADHAAALASAQADVDAAKHMLIVKDAVAQNATKLDELKTLSDESQQALTELAKQKPTFVQTYQERVAQLSDQEAAVAK
IASLFSDTDFKTPKPNLNSAQVQAALTAVEDLDNKQFAAQVMPLISTAQNATSSDDSRDPEPSASSALPSSADSSPSAVA
SSSDQASSANASGSESEQSQASSSTSTATSSSSQNP

Sequences:

>Translated_276_residues
MKRRTLFSIIVITLTAGFFTLFYGMHSTWTDTRSAQAVQAATDQVNDLFKDQSHQLPSDQLNKQAIAAAETKLQQARQKA
NDADHAAALASAQADVDAAKHMLIVKDAVAQNATKLDELKTLSDESQQALTELAKQKPTFVQTYQERVAQLSDQEAAVAK
IASLFSDTDFKTPKPNLNSAQVQAALTAVEDLDNKQFAAQVMPLISTAQNATSSDDSRDPEPSASSALPSSADSSPSAVA
SSSDQASSANASGSESEQSQASSSTSTATSSSSQNP
>Mature_276_residues
MKRRTLFSIIVITLTAGFFTLFYGMHSTWTDTRSAQAVQAATDQVNDLFKDQSHQLPSDQLNKQAIAAAETKLQQARQKA
NDADHAAALASAQADVDAAKHMLIVKDAVAQNATKLDELKTLSDESQQALTELAKQKPTFVQTYQERVAQLSDQEAAVAK
IASLFSDTDFKTPKPNLNSAQVQAALTAVEDLDNKQFAAQVMPLISTAQNATSSDDSRDPEPSASSALPSSADSSPSAVA
SSSDQASSANASGSESEQSQASSSTSTATSSSSQNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29146; Mature: 29146

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHCCCCCCCCHHHHHHHHCCCHHCCCCCCCCC
>Mature Secondary Structure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CCCCHHCCCCCCCCHHHHHHHHCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA