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The map label for this gene is 116496063

Identifier: 116496063

GI number: 116496063

Start: 2621443

End: 2621859

Strand: Direct

Name: 116496063

Synonym: LSEI_2636

Alternate gene names: NA

Gene position: 2621443-2621859 (Clockwise)

Preceding gene: 116496059

Following gene: 116496064

Centisome position: 90.54

GC content: 47.24

Gene sequence:

>417_bases
ATGAAAAAGCAATATTTGGCAGCCAGTCAGTCGGTGAATCAATTCAACCGACTCTTTTCACCGGTTTCAACATCGGAAAT
TCCATTGAATCAACAAAACCTGCTTTTCTGGATGGCGACCGATGCCACGCCAAGAACACCAACGAGCTTGGCCAAAGAGA
TGCACGTCACTAAGGCTGCGATCACCAAAGCCAGCAGCCCGTTGATTGACCGGGGGTTGCTTGAAAAACAACCCGATCCT
GAAGATTGTCGCAGCTTCAAGCTCGTGCTTAGCGAAGAAGGTAAGCAAGCAATTGAGGATCTCGGGCCTGAATACTTGGG
CAACTTAGAACGTCTCTATCATGAACTTGGCGAGAAAAAGTATCTGAAGTTGATCAAACTTCTCAGCCAAGCAACTGGCA
CCTTAGTCACCGAATAA

Upstream 100 bases:

>100_bases
ACAAATCGAGCTTTTTTCTGCCGTATTTATTGCGTCAATCAACCTCAATCCTTCATACTAAAAGTATACAGAGGTTATGA
AAAAAAGGGGGAGCACTTTT

Downstream 100 bases:

>100_bases
ACCGGTCATCTCGTGGCACAAACACCTCATGGAGATCACCACAATCAAGCCTGACGCTCAGTTGCGTGAGGCTTTTTCAG
TTGACTGGGCGACACAATTT

Product: transcriptional regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKKQYLAASQSVNQFNRLFSPVSTSEIPLNQQNLLFWMATDATPRTPTSLAKEMHVTKAAITKASSPLIDRGLLEKQPDP
EDCRSFKLVLSEEGKQAIEDLGPEYLGNLERLYHELGEKKYLKLIKLLSQATGTLVTE

Sequences:

>Translated_138_residues
MKKQYLAASQSVNQFNRLFSPVSTSEIPLNQQNLLFWMATDATPRTPTSLAKEMHVTKAAITKASSPLIDRGLLEKQPDP
EDCRSFKLVLSEEGKQAIEDLGPEYLGNLERLYHELGEKKYLKLIKLLSQATGTLVTE
>Mature_138_residues
MKKQYLAASQSVNQFNRLFSPVSTSEIPLNQQNLLFWMATDATPRTPTSLAKEMHVTKAAITKASSPLIDRGLLEKQPDP
EDCRSFKLVLSEEGKQAIEDLGPEYLGNLERLYHELGEKKYLKLIKLLSQATGTLVTE

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15493; Mature: 15493

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQYLAASQSVNQFNRLFSPVSTSEIPLNQQNLLFWMATDATPRTPTSLAKEMHVTKAA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
ITKASSPLIDRGLLEKQPDPEDCRSFKLVLSEEGKQAIEDLGPEYLGNLERLYHELGEKK
HHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHH
YLKLIKLLSQATGTLVTE
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKQYLAASQSVNQFNRLFSPVSTSEIPLNQQNLLFWMATDATPRTPTSLAKEMHVTKAA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
ITKASSPLIDRGLLEKQPDPEDCRSFKLVLSEEGKQAIEDLGPEYLGNLERLYHELGEKK
HHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHH
YLKLIKLLSQATGTLVTE
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA