Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is 116496029

Identifier: 116496029

GI number: 116496029

Start: 2580186

End: 2581097

Strand: Direct

Name: 116496029

Synonym: LSEI_2600

Alternate gene names: NA

Gene position: 2580186-2581097 (Clockwise)

Preceding gene: 116496028

Following gene: 116496030

Centisome position: 89.12

GC content: 50.99

Gene sequence:

>912_bases
ATGACAGTGAATGAATGGTGGTGGCTAGCCACATTCGGCCTGTTGACAGTTGGCTGTTGCCTGCTTCTATGGTGGACCTT
CCGCCGACAACAAAATTGGCCTGTGCGCGGTTTGAATCTGGCTGTCACATTGCTGGCCTTGGGCGGTTGGTGGCTTTGGC
CGCTGCCAAGTGTGCGGTTTGTGCTTTTCTGCAGCGCCGTTTTGACCGGCACCTTGGAGTTTGTCTTAATGCGTCAATTC
CTCAACGATCAGGACGCCGTATTCGCCCGCAGCCTCGATAAAATGATGGCCCAATATTCGCAAGAAGTACAGGAACTTTA
TGCCAATATGCGCGGATGGCGCCATGATTACCATGATCATTTGCAGGCGCTCAAAGCTTACTTAGATAATCAGGATACGC
AGGCAGCCCGCGCCTATCTCGACGAACTAGAAGACAAGCTGGACGAAGTTGATCCGCTCGTTCACTCTGGCAATGCCATG
TTGGACGCTATCGTCAATGCTAAGCTGACATTGGCCGAACGGTTGCACATCCCCGTCAATGAAAAAGTGATTGTCGGCAG
CACACCGTTAATTAAAGATGTCGATTTGGTTGTCATCTTGGGAAACCTGTTAGACAACGCCATTGAAGCAATCAGTGAGC
AACCGGCTAGTGAGCCGCGCCAACTGCGGCTGTACATCGGCATCGTCAAGCAACAGTTTTACATATCCGTTACCAACACC
CGGCCTGCCGATCAAGAAATCGATTATCAGTACGCCTCGACCAAAAGTGACAAACGCGGCCTCGGTATCCGGCGCGTCAA
CAAACTCGTGGCCAAGTATAATGGCATGATCAATCGCCAATATGAAGCCTCCATTTTCGTCACCGAAATTGCCATTCCCA
TTCACGCCGTTAAATCGACCACTCACGCATAA

Upstream 100 bases:

>100_bases
AACACCGTCGTCATGGCTGATGGTACCAGTTACCCGGTTTCTCGGCAACAAGCACCGCTCGTCAAACAAGCCTTCTTTAA
ACATTTTCGGGGGTTAGCTC

Downstream 100 bases:

>100_bases
TCTGCCGCGAGTGGCCGATTTTTTGCTAAATTAAGATCAACGAGGTGATCGACATGAAAAAATACGGGTTGTTCAACAAC
TTAAGGTGGTACTTAACTTA

Product: signal transduction protein

Products: NA

Alternate protein names: Two-Component Sensor Histidine Kinase; Histidine Kinase-Related ATPase; Membrane Associated Histidine Kinase-Like ATPase; Histidine Kinase; VirS Homolog; Two Component Sensor Transduction Histidine Kinase

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTVNEWWWLATFGLLTVGCCLLLWWTFRRQQNWPVRGLNLAVTLLALGGWWLWPLPSVRFVLFCSAVLTGTLEFVLMRQF
LNDQDAVFARSLDKMMAQYSQEVQELYANMRGWRHDYHDHLQALKAYLDNQDTQAARAYLDELEDKLDEVDPLVHSGNAM
LDAIVNAKLTLAERLHIPVNEKVIVGSTPLIKDVDLVVILGNLLDNAIEAISEQPASEPRQLRLYIGIVKQQFYISVTNT
RPADQEIDYQYASTKSDKRGLGIRRVNKLVAKYNGMINRQYEASIFVTEIAIPIHAVKSTTHA

Sequences:

>Translated_303_residues
MTVNEWWWLATFGLLTVGCCLLLWWTFRRQQNWPVRGLNLAVTLLALGGWWLWPLPSVRFVLFCSAVLTGTLEFVLMRQF
LNDQDAVFARSLDKMMAQYSQEVQELYANMRGWRHDYHDHLQALKAYLDNQDTQAARAYLDELEDKLDEVDPLVHSGNAM
LDAIVNAKLTLAERLHIPVNEKVIVGSTPLIKDVDLVVILGNLLDNAIEAISEQPASEPRQLRLYIGIVKQQFYISVTNT
RPADQEIDYQYASTKSDKRGLGIRRVNKLVAKYNGMINRQYEASIFVTEIAIPIHAVKSTTHA
>Mature_302_residues
TVNEWWWLATFGLLTVGCCLLLWWTFRRQQNWPVRGLNLAVTLLALGGWWLWPLPSVRFVLFCSAVLTGTLEFVLMRQFL
NDQDAVFARSLDKMMAQYSQEVQELYANMRGWRHDYHDHLQALKAYLDNQDTQAARAYLDELEDKLDEVDPLVHSGNAML
DAIVNAKLTLAERLHIPVNEKVIVGSTPLIKDVDLVVILGNLLDNAIEAISEQPASEPRQLRLYIGIVKQQFYISVTNTR
PADQEIDYQYASTKSDKRGLGIRRVNKLVAKYNGMINRQYEASIFVTEIAIPIHAVKSTTHA

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34646; Mature: 34515

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNEWWWLATFGLLTVGCCLLLWWTFRRQQNWPVRGLNLAVTLLALGGWWLWPLPSVRF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
VLFCSAVLTGTLEFVLMRQFLNDQDAVFARSLDKMMAQYSQEVQELYANMRGWRHDYHDH
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LQALKAYLDNQDTQAARAYLDELEDKLDEVDPLVHSGNAMLDAIVNAKLTLAERLHIPVN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
EKVIVGSTPLIKDVDLVVILGNLLDNAIEAISEQPASEPRQLRLYIGIVKQQFYISVTNT
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHEEEHHEEEEEECCC
RPADQEIDYQYASTKSDKRGLGIRRVNKLVAKYNGMINRQYEASIFVTEIAIPIHAVKST
CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHHHHHHHC
THA
CCC
>Mature Secondary Structure 
TVNEWWWLATFGLLTVGCCLLLWWTFRRQQNWPVRGLNLAVTLLALGGWWLWPLPSVRF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
VLFCSAVLTGTLEFVLMRQFLNDQDAVFARSLDKMMAQYSQEVQELYANMRGWRHDYHDH
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LQALKAYLDNQDTQAARAYLDELEDKLDEVDPLVHSGNAMLDAIVNAKLTLAERLHIPVN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
EKVIVGSTPLIKDVDLVVILGNLLDNAIEAISEQPASEPRQLRLYIGIVKQQFYISVTNT
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHEEEHHEEEEEECCC
RPADQEIDYQYASTKSDKRGLGIRRVNKLVAKYNGMINRQYEASIFVTEIAIPIHAVKST
CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHHHHHHHC
THA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA