| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is lacX [H]
Identifier: 116496027
GI number: 116496027
Start: 2578421
End: 2579302
Strand: Direct
Name: lacX [H]
Synonym: LSEI_2598
Alternate gene names: 116496027
Gene position: 2578421-2579302 (Clockwise)
Preceding gene: 116496026
Following gene: 116496028
Centisome position: 89.06
GC content: 48.98
Gene sequence:
>882_bases TTGATCACAATTGAAAACAGCAAATTTAAAGCAGGCATTGCCGAGCGCGGTGCTGAATTGCAGTCGCTGGTAAATAAAGC CGACAACTATGAGTATGTCTGGACAGGTGACAAAACTTTTTGGAATCGGCATGCGCCTATTCTGTTCCCATCTATCGGGA AGTCTAATCAGGATCAATATCGGTTAGGCGCAAAAACCTATCCAATGAGTCAGCATGGATTTGCTCGTGACTATGACTTT GATGTCAGCGATAAGAGCGACTCAGCGGTCACCTTCACGCAACATCAAAATGCTGAGACATTGAAGAAGTTCCCGTTTGA GTATACCTTGGCTGTCACTTACATGTTGACGGACGGCGGCCTCAGCGTACATTACACGGTCACAAATGACGATTCTAAAT CAATGCCATTTGCTTTAGGGTTCCACCCTGCCTTTAATGTCGGCTTGAAAGCTGATGGCAGTTTCGACGATTACGACCTC ACTGTTGAACCATTAAACAGCCCACTACAACGATTCGGCATCGGCCCTGTGCCATTCCGCAATGGCGATGTTGAGGACAT CCCCGGCGCAGAAGGCAATCGTTTGCCCCTGACACATGATCTTCTTGATGGTGGTCTCGTGATTCTCGCTAACAGCGAAA TTGCCAAGGCAACCCTCGCATCACCGCACCATGACCACAGCATCACCCTCGATATCAGCGACTTTCCATATCTCACCATC TGGAGCCCAGAACATAAAAAGGCACCTTTCATCGCCGTTGAGCCATTCGATGGTCTGCCAGATCAAGCTGGCGAACCAAC CGACTGGTACACCAAGCTCGGCAACACCACGCTATCTGCTGGTGCCAACAAGCAATTGGCCTTGAAGGTTGAGCTTCACT AA
Upstream 100 bases:
>100_bases AAAATGAAGTTCAAAAAACTTGCTAACAATCATTGCAGGTCAGTGATCCAGTGGTAGACTGGTATTGAATGCGTTTTCGT CTATTAGGAGGTAATTCAAC
Downstream 100 bases:
>100_bases TCGAAGTTTACCACCCAATCGTCCGACACAATTCGGGCGATTTTTTTGTGAGCGCGGGGCAGCTCGGTAGCAACCGAAGT GTCAGCAGTCAAAAAAAGCT
Product: galactose mutarotase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MITIENSKFKAGIAERGAELQSLVNKADNYEYVWTGDKTFWNRHAPILFPSIGKSNQDQYRLGAKTYPMSQHGFARDYDF DVSDKSDSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGGLSVHYTVTNDDSKSMPFALGFHPAFNVGLKADGSFDDYDL TVEPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTI WSPEHKKAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVELH
Sequences:
>Translated_293_residues MITIENSKFKAGIAERGAELQSLVNKADNYEYVWTGDKTFWNRHAPILFPSIGKSNQDQYRLGAKTYPMSQHGFARDYDF DVSDKSDSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGGLSVHYTVTNDDSKSMPFALGFHPAFNVGLKADGSFDDYDL TVEPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTI WSPEHKKAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVELH >Mature_293_residues MITIENSKFKAGIAERGAELQSLVNKADNYEYVWTGDKTFWNRHAPILFPSIGKSNQDQYRLGAKTYPMSQHGFARDYDF DVSDKSDSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGGLSVHYTVTNDDSKSMPFALGFHPAFNVGLKADGSFDDYDL TVEPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTI WSPEHKKAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVELH
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: NA
Molecular weight: Translated: 32412; Mature: 32412
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIENSKFKAGIAERGAELQSLVNKADNYEYVWTGDKTFWNRHAPILFPSIGKSNQDQY CEEECCCCEECCHHHCCHHHHHHHHHCCCCEEEECCCCHHCCCCCCEEEECCCCCCCCCE RLGAKTYPMSQHGFARDYDFDVSDKSDSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGG EECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCEEEEEEEEEEECCC LSVHYTVTNDDSKSMPFALGFHPAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFR EEEEEEEECCCCCCCCEEEECCCCEECCEECCCCCCCCEEEECCCCCHHHHHCCCCCCCC NGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTI CCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCHHHHHHCCCCCCCEEEEEECCCCEEEE WSPEHKKAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVELH ECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCCEEEECCCCCEEEEEEEEC >Mature Secondary Structure MITIENSKFKAGIAERGAELQSLVNKADNYEYVWTGDKTFWNRHAPILFPSIGKSNQDQY CEEECCCCEECCHHHCCHHHHHHHHHCCCCEEEECCCCHHCCCCCCEEEECCCCCCCCCE RLGAKTYPMSQHGFARDYDFDVSDKSDSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGG EECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCEEEEEEEEEEECCC LSVHYTVTNDDSKSMPFALGFHPAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFR EEEEEEEECCCCCCCCEEEECCCCEECCEECCCCCCCCEEEECCCCCHHHHHCCCCCCCC NGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTI CCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCHHHHHHCCCCCCCEEEEEECCCCEEEE WSPEHKKAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVELH ECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCCEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339371 [H]