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The map label for this gene is agrA [H]

Identifier: 116495836

GI number: 116495836

Start: 2384199

End: 2385005

Strand: Direct

Name: agrA [H]

Synonym: LSEI_2389

Alternate gene names: 116495836

Gene position: 2384199-2385005 (Clockwise)

Preceding gene: 116495833

Following gene: 116495838

Centisome position: 82.35

GC content: 42.01

Gene sequence:

>807_bases
ATGACCAACCACCAAACGATGCTGAAGATTTTCATTCTGGAAGACAATGCTGACTTCTTGAATTTCCTAGAAAGTACACT
TCGCAATTATATTATGATTGAGGCATTGCATGCCGAAATCAAATTCACCACTCAGTCAGCGACAGATTTGTTAGATGCTG
TTGATCTAGAAGAGATTAATGACTGCCTTTTTCTGCTGGACATTGACATCCCTGGATCTTCTGTAAGTGGTATTGATATC
GCCACCATCCTTCGAAAAAAGTCCTTATACGCTGACATCATGTTCATCACCAGTCACACTGAAGAAGCCTTGTCGATTCT
GGCCCACAAAATTGCGCCTTTAGACTTAATTGATAAAAGTGTGCTTTTTGAAGTTGAAGCGCGACTGCGATCAAATATTG
TTTACGCCATCAAGCGATTGAAGGCGCGTCAATTGCAATCGCCACGACTTTTTAATTACAGCATTGATTCAAATCTTTTT
ACGGTTATATTAGATGAGCTACTTTACATTCAAACAACCCCTGGTATCTCTGGTACGTTGGAACTACATGCAGAACGCGA
AATCGCAACCTTTCCGGGAAACCTGAAGGAGGTATCGCTCCAATACCCAACATTGTTTCGCTGTCATCGAAGCATTTTGC
TCAACCCAACGCATATTTCTAAATTGGACACGCATGGCCGTTTTGTTTACATGGATAATCAAGACAAACTTGAGGTCAGC
ATTCGTAGAGTATCGGCCCTGCGTCAGGTCATGATGACCGCGAATAAACCACAGTCTGCTACCAATGATCTGTCAAATGA
TGCTTGA

Upstream 100 bases:

>100_bases
ATCATAAATGAGTTAATCCAGCAGAATAAAAATATCATCATTAAAAAGACCGTTATTAACAAGCAACTAAAGATCACTTT
GTTTATAGGGAGATGACTTC

Downstream 100 bases:

>100_bases
ATGGTATATCTCTTTTTTCGCGTCTCCACTAGAAGCGAATCTAAACGGTGATGAAAATAAAGGTCACTTGAAAAAACTCC
AATATTCCCATAACCTGGCA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTNHQTMLKIFILEDNADFLNFLESTLRNYIMIEALHAEIKFTTQSATDLLDAVDLEEINDCLFLLDIDIPGSSVSGIDI
ATILRKKSLYADIMFITSHTEEALSILAHKIAPLDLIDKSVLFEVEARLRSNIVYAIKRLKARQLQSPRLFNYSIDSNLF
TVILDELLYIQTTPGISGTLELHAEREIATFPGNLKEVSLQYPTLFRCHRSILLNPTHISKLDTHGRFVYMDNQDKLEVS
IRRVSALRQVMMTANKPQSATNDLSNDA

Sequences:

>Translated_268_residues
MTNHQTMLKIFILEDNADFLNFLESTLRNYIMIEALHAEIKFTTQSATDLLDAVDLEEINDCLFLLDIDIPGSSVSGIDI
ATILRKKSLYADIMFITSHTEEALSILAHKIAPLDLIDKSVLFEVEARLRSNIVYAIKRLKARQLQSPRLFNYSIDSNLF
TVILDELLYIQTTPGISGTLELHAEREIATFPGNLKEVSLQYPTLFRCHRSILLNPTHISKLDTHGRFVYMDNQDKLEVS
IRRVSALRQVMMTANKPQSATNDLSNDA
>Mature_267_residues
TNHQTMLKIFILEDNADFLNFLESTLRNYIMIEALHAEIKFTTQSATDLLDAVDLEEINDCLFLLDIDIPGSSVSGIDIA
TILRKKSLYADIMFITSHTEEALSILAHKIAPLDLIDKSVLFEVEARLRSNIVYAIKRLKARQLQSPRLFNYSIDSNLFT
VILDELLYIQTTPGISGTLELHAEREIATFPGNLKEVSLQYPTLFRCHRSILLNPTHISKLDTHGRFVYMDNQDKLEVSI
RRVSALRQVMMTANKPQSATNDLSNDA

Specific function: Required for high-level post-exponential phase expression of a series of secreted proteins [H]

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 30428; Mature: 30297

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNHQTMLKIFILEDNADFLNFLESTLRNYIMIEALHAEIKFTTQSATDLLDAVDLEEIN
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHEEEEEEEEEEEEECCHHHHHHHHCCHHHHC
DCLFLLDIDIPGSSVSGIDIATILRKKSLYADIMFITSHTEEALSILAHKIAPLDLIDKS
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHCCCHHHHHHH
VLFEVEARLRSNIVYAIKRLKARQLQSPRLFNYSIDSNLFTVILDELLYIQTTPGISGTL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHEEEECCCCCEEE
ELHAEREIATFPGNLKEVSLQYPTLFRCHRSILLNPTHISKLDTHGRFVYMDNQDKLEVS
EEEECCEEEECCCCCEEEEECCCHHHHHHHHHCCCCHHHCEECCCCEEEEECCCCCHHHH
IRRVSALRQVMMTANKPQSATNDLSNDA
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNHQTMLKIFILEDNADFLNFLESTLRNYIMIEALHAEIKFTTQSATDLLDAVDLEEIN
CCCCEEEEEEEEECCCHHHHHHHHHHHHHEEEEEEEEEEEEECCHHHHHHHHCCHHHHC
DCLFLLDIDIPGSSVSGIDIATILRKKSLYADIMFITSHTEEALSILAHKIAPLDLIDKS
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHCCCHHHHHHH
VLFEVEARLRSNIVYAIKRLKARQLQSPRLFNYSIDSNLFTVILDELLYIQTTPGISGTL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHEEEECCCCCEEE
ELHAEREIATFPGNLKEVSLQYPTLFRCHRSILLNPTHISKLDTHGRFVYMDNQDKLEVS
EEEECCEEEECCCCCEEEEECCCHHHHHHHHHCCCCHHHCEECCCCEEEEECCCCCHHHH
IRRVSALRQVMMTANKPQSATNDLSNDA
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA