| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
Click here to switch to the map view.
The map label for this gene is 116495805
Identifier: 116495805
GI number: 116495805
Start: 2352250
End: 2352426
Strand: Direct
Name: 116495805
Synonym: LSEI_2355
Alternate gene names: NA
Gene position: 2352250-2352426 (Clockwise)
Preceding gene: 116495801
Following gene: 116495806
Centisome position: 81.24
GC content: 35.03
Gene sequence:
>177_bases ATGCGCTTTTATTTTTTGACTTTAATTAAAAAAGTTCTCAAAATATTGACAAGTCAGCCGCCTCTTTTTACTGAAAAGTG TTGCTTTCATCGATTGAAAAGTCGACACCATTTGCAAAAGACGCCCTGCTTCAGTATTGACATCTTCACTGAAAAAGCCA ACGATAAGAAACAATAG
Upstream 100 bases:
>100_bases GAGCTAAGGTTAACAGGGCGAAAGTTTTATCGTCAACATAAATGATCAATTATATATAAATTTTCATAATTTCGTCACAA TCCCGCCAAAAGGCAGTTGA
Downstream 100 bases:
>100_bases ACTCCAAACAAGGCGATGATTTTCGTGGATAGGCACATTTTTGGTGCAACTTTCTCTTCACTGCGGTCAACCAATTTCCG CCGCTTCTGGATTGGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MRFYFLTLIKKVLKILTSQPPLFTEKCCFHRLKSRHHLQKTPCFSIDIFTEKANDKKQ
Sequences:
>Translated_58_residues MRFYFLTLIKKVLKILTSQPPLFTEKCCFHRLKSRHHLQKTPCFSIDIFTEKANDKKQ >Mature_58_residues MRFYFLTLIKKVLKILTSQPPLFTEKCCFHRLKSRHHLQKTPCFSIDIFTEKANDKKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6998; Mature: 6998
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYFLTLIKKVLKILTSQPPLFTEKCCFHRLKSRHHLQKTPCFSIDIFTEKANDKKQ CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MRFYFLTLIKKVLKILTSQPPLFTEKCCFHRLKSRHHLQKTPCFSIDIFTEKANDKKQ CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA