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The map label for this gene is cdaR [C]

Identifier: 116495801

GI number: 116495801

Start: 2350476

End: 2351030

Strand: Direct

Name: cdaR [C]

Synonym: LSEI_2351

Alternate gene names: 116495801

Gene position: 2350476-2351030 (Clockwise)

Preceding gene: 116495800

Following gene: 116495805

Centisome position: 81.18

GC content: 38.2

Gene sequence:

>555_bases
TTGTCAACTTATTTCGTCATTGAAACGGCATCGGGTGCTACGGCAATCCTTTTCATGGCTCCACGACAAAGAAAAGACAA
GCTAAGTACTATTCCTCCTTATTTCCGCTCATTAACACAAATTCAAGCCGCTTACACAGACTTATACTTTGGAGTCTCAG
ACATTCAACCTGCTCGTCAATTACAAACTGCCAATCAAGAGGCAAGCTTCAGCATTAAAGTAGCAAAATTGTTCAATCCG
CAAAAAAAGCTTATATTGTTTCACGATGTAGCCTTGTGGTCAATGATCAATAATGCCCAACAATCAACCTCGACAAAATT
AATTCCGATGAGATTAAAAGACATCCTTCAGAACCCGGAACTTTTTAAAACATTGAGAGTCTTTTTTCAAAACAACGAAT
CTGTTAAAAATACCAGCCGCATCCTATACACGCATCCCAACACGATTCGTTATCGGTTAAAAGAAATCATGCTTAAAACA
GGACTAGACTATCGCAAAACTGATGATAAGTTTTACTTGTATGTTGCCGTCATTACAAAAATGCTCAACCAGTGA

Upstream 100 bases:

>100_bases
TCGTTATCATCGTTGCACTTGACTTGAAAATTGAGGAGATCTTTATTCATTAACTGGTCAATTGCACACAATATTTACTA
CTGCTGTTCATCAGGCAACT

Downstream 100 bases:

>100_bases
CCTTCACTATCAATTTTTACAAACAAATATATTTGAGTATAGAAAAAGAGTTTCCGTTAAAAACGGAAACTCTTTTTTCA
CGCTAGTGACGTGCACCCGG

Product: sugar diacid utilization regulator

Products: NA

Alternate protein names: Sugar Diacid Utilization Regulator

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSTYFVIETASGATAILFMAPRQRKDKLSTIPPYFRSLTQIQAAYTDLYFGVSDIQPARQLQTANQEASFSIKVAKLFNP
QKKLILFHDVALWSMINNAQQSTSTKLIPMRLKDILQNPELFKTLRVFFQNNESVKNTSRILYTHPNTIRYRLKEIMLKT
GLDYRKTDDKFYLYVAVITKMLNQ

Sequences:

>Translated_184_residues
MSTYFVIETASGATAILFMAPRQRKDKLSTIPPYFRSLTQIQAAYTDLYFGVSDIQPARQLQTANQEASFSIKVAKLFNP
QKKLILFHDVALWSMINNAQQSTSTKLIPMRLKDILQNPELFKTLRVFFQNNESVKNTSRILYTHPNTIRYRLKEIMLKT
GLDYRKTDDKFYLYVAVITKMLNQ
>Mature_183_residues
STYFVIETASGATAILFMAPRQRKDKLSTIPPYFRSLTQIQAAYTDLYFGVSDIQPARQLQTANQEASFSIKVAKLFNPQ
KKLILFHDVALWSMINNAQQSTSTKLIPMRLKDILQNPELFKTLRVFFQNNESVKNTSRILYTHPNTIRYRLKEIMLKTG
LDYRKTDDKFYLYVAVITKMLNQ

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21386; Mature: 21255

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYFVIETASGATAILFMAPRQRKDKLSTIPPYFRSLTQIQAAYTDLYFGVSDIQPARQ
CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHH
LQTANQEASFSIKVAKLFNPQKKLILFHDVALWSMINNAQQSTSTKLIPMRLKDILQNPE
HHHCCCCCCEEEEEHHHCCCCHHEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHH
LFKTLRVFFQNNESVKNTSRILYTHPNTIRYRLKEIMLKTGLDYRKTDDKFYLYVAVITK
HHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHH
MLNQ
HHCC
>Mature Secondary Structure 
STYFVIETASGATAILFMAPRQRKDKLSTIPPYFRSLTQIQAAYTDLYFGVSDIQPARQ
CEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHH
LQTANQEASFSIKVAKLFNPQKKLILFHDVALWSMINNAQQSTSTKLIPMRLKDILQNPE
HHHCCCCCCEEEEEHHHCCCCHHEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHH
LFKTLRVFFQNNESVKNTSRILYTHPNTIRYRLKEIMLKTGLDYRKTDDKFYLYVAVITK
HHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHH
MLNQ
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA