Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495790

Identifier: 116495790

GI number: 116495790

Start: 2339339

End: 2339623

Strand: Direct

Name: 116495790

Synonym: LSEI_2338

Alternate gene names: NA

Gene position: 2339339-2339623 (Clockwise)

Preceding gene: 116495789

Following gene: 116495796

Centisome position: 80.8

GC content: 47.72

Gene sequence:

>285_bases
ATGACAACATATGATGTCACATTCAACACCGTCGATGGCAAGTCGCTGATTAAGCGCAACGTGGAAAGCGACCACGAAAA
CGCCCGGGTCTGGGAGGACGCGGTTGAGCGATTTGACGCCGATCACCTCTACATCAAAATGAACGACAAGACAATGGTCA
GCCTTTTGCGGCGTGCCGTTGTTCGTATCGACATGACTGAATTACCTAGTAATGTCGAAAAAAAGGCTAATCGCCGAGAT
GAATTTCGTAATGCCATGTACACATTAAGTCAAATCGGGCTGTGA

Upstream 100 bases:

>100_bases
ACTGCGTATTTGCTGGCCAATACCTTATATCTTTGGCAATTCATTCTCCATCCCAACGACCCGTTGTATAATGAAAGTGA
TCAATGAAGGGAGAATTCAT

Downstream 100 bases:

>100_bases
CCTGATTGCCGCTAAGCCTTGTTGCCATTTCAAATGGCAGCGGGGCTTTTTTGATGTGATCGTTAGCAGATAAAGCTGAC
TGTGATTGCCCTTAAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTTYDVTFNTVDGKSLIKRNVESDHENARVWEDAVERFDADHLYIKMNDKTMVSLLRRAVVRIDMTELPSNVEKKANRRD
EFRNAMYTLSQIGL

Sequences:

>Translated_94_residues
MTTYDVTFNTVDGKSLIKRNVESDHENARVWEDAVERFDADHLYIKMNDKTMVSLLRRAVVRIDMTELPSNVEKKANRRD
EFRNAMYTLSQIGL
>Mature_93_residues
TTYDVTFNTVDGKSLIKRNVESDHENARVWEDAVERFDADHLYIKMNDKTMVSLLRRAVVRIDMTELPSNVEKKANRRDE
FRNAMYTLSQIGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11025; Mature: 10893

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYDVTFNTVDGKSLIKRNVESDHENARVWEDAVERFDADHLYIKMNDKTMVSLLRRAV
CCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
VRIDMTELPSNVEKKANRRDEFRNAMYTLSQIGL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTYDVTFNTVDGKSLIKRNVESDHENARVWEDAVERFDADHLYIKMNDKTMVSLLRRAV
CEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
VRIDMTELPSNVEKKANRRDEFRNAMYTLSQIGL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA