| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495665
Identifier: 116495665
GI number: 116495665
Start: 2207225
End: 2207395
Strand: Direct
Name: 116495665
Synonym: LSEI_2210
Alternate gene names: NA
Gene position: 2207225-2207395 (Clockwise)
Preceding gene: 116495663
Following gene: 116495669
Centisome position: 76.24
GC content: 46.2
Gene sequence:
>171_bases ATGCTGAGCAATCGCGAGCCATATCCAATTATCGATTATTTAGGCCGACCTATCAAGCTGTCACTGTTTGTGACCTATCG ATTACGCATTAAAAACGGCTATATCCTTGCACTGCGCCGAAATCAACATCAGCAAGTGATCCCGAACCTCATGGCCAAGA ATGCGAGCTGA
Upstream 100 bases:
>100_bases TTCTTACGCCAGTATAGCATGGACTTCAAGTCTGGCGAAGCGGGATTGTCATAAACTTGTTACACATACTGTTATATAAT AGTAGTGGGAGATGAGGATG
Downstream 100 bases:
>100_bases TTCGGTTGCTGCAACAGCCACTGATGAACGGTTACTAATTGGCTAGGATGGTGTGTATCAATGCACCATCCTTTTTTGAT GGCGCCAGATGCGGCATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS
Sequences:
>Translated_56_residues MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS >Mature_56_residues MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6599; Mature: 6599
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS CCCCCCCCCHHHHCCCCEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCC >Mature Secondary Structure MLSNREPYPIIDYLGRPIKLSLFVTYRLRIKNGYILALRRNQHQQVIPNLMAKNAS CCCCCCCCCHHHHCCCCEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA