| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495655
Identifier: 116495655
GI number: 116495655
Start: 2196476
End: 2196844
Strand: Direct
Name: 116495655
Synonym: LSEI_2200
Alternate gene names: NA
Gene position: 2196476-2196844 (Clockwise)
Preceding gene: 116495645
Following gene: 116495656
Centisome position: 75.86
GC content: 44.44
Gene sequence:
>369_bases ATGAAAAAAATCTTGATTGGTATTGGCATCTTCATTGGCCTCGTCATTCTTGGCGGTGCAGGGTTTTACGCTTGGTATAC TCAAAGCACCCCTTATTACACCCAGATTACGACGACAGGCAAGAAGTTTGATGTTATCGATGATGAGACCGGTGCTGCGC GGGATATTGATTATCCCTATACTCAGATGGCCTATGATGAAAAAGGCCACGGTACAGAGGTTGATTTCAACGGTCACAAA TCTCGGCCTTTGAAAATGCAAGCTTATCTCCGCCTCGATTACAGCACGCGTCGAAACCAAGTGATTAGTTGGGAAGCCGT ACCAAAGGAAAAGGTTCCTAAAGCAGCTTTAGCAAAATTAAATCGCTAA
Upstream 100 bases:
>100_bases TTATAAGGTAATCGAGTCATTTTAATGTTCGAATGAATGATATTATTGTTATAATTTATACAATAAGTTGCATATACACC GTTTGGGAGGGGATATGAAT
Downstream 100 bases:
>100_bases TTAAAAAAAGTGCGCTGGCGCAGTTTGAAACCTGCGCCAGCAAACACATTTACAAGGAGATGTCTATTATGACGAATGAA CACAAAGTTTTACGCGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPYTQMAYDEKGHGTEVDFNGHK SRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR
Sequences:
>Translated_122_residues MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPYTQMAYDEKGHGTEVDFNGHK SRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR >Mature_122_residues MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPYTQMAYDEKGHGTEVDFNGHK SRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR
Specific function: Unknown
COG id: COG5294
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13827; Mature: 13827
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPY CCEEEEHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCC TQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKL HHEEECCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCHHCCHHHHHHC NR CC >Mature Secondary Structure MKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYPY CCEEEEHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCC TQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKL HHEEECCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCHHCCHHHHHHC NR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA