Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495641

Identifier: 116495641

GI number: 116495641

Start: 2177267

End: 2178694

Strand: Direct

Name: 116495641

Synonym: LSEI_2186

Alternate gene names: NA

Gene position: 2177267-2178694 (Clockwise)

Preceding gene: 116495640

Following gene: 116495645

Centisome position: 75.2

GC content: 47.13

Gene sequence:

>1428_bases
ATGATTGATCGTATTGAAATTTCAGCTTGCACATCCATGATGGTCGGTAAAAAAGCATCCCTTGACGGCGCGACCTACAT
CTCCCGCAACGAGGATCGCTTAGTCGCAATCTATCCAAAACGTTTTGTGGTTCAACTAGCTGTAACTGGCCGCAAGGAAA
CTTATGTATCGCCATATAACAACCTGACTGTGCCACTCCCCGAATCCGGGTATCGTTACACATCCACACCCGATGCTGAC
CAAAGCGCCGGACCAAATGAAGAAGACGGTTTTAATGAAAAGAATGTCGGCGAAAGTGCTACCGAAAGTGTTTATGCCAA
CGAACGGGTACTTGCTTATGATCCCTTCATCAAAAATGGACTCGCGGAAGACTCCATGACAACTTTAGTGTTACCGTTTA
TCAACAGTGCCCGCGATGGCGTCCGGTATCTCGGCGAACTGGTCAAAAAGTACGGTTCAGCTGAAGGCAATGGTGTCCAA
TTTAACGATCAAGACGAAGTTTGGTATATGGAAATTGTCACCGGTCATCAATGGGTTGCGGTTCGCATTCCTGACGATTG
TTACGCAGTTGCTGCCAACCAAATTGCGATTCAGGACATTGATTTCAATGATCCGGACAACTATATGTGGGCAGATGGCA
TTCAAGATTTCGTCAAAGATCACAACTTGAATCCTGACGCCGATCACTGGAACTTCCGGCACATTTTTGGCACCGACACT
GAAAAGGATCACCACTACAATACACCACGGGTTTGGTTCGCCCAACGCTACCTCAATCCAGAAATTGAGCAGGATCCGGA
ATCAGCTGAATTGCCGTTCATTCGCAAGGCCAACCGCAAAATTTCCGTTGAAGATATTCAGTACATTATGAAATCCCACT
TCAATGAAACCAAATTTGATCCGTTGGGTCACGGCAATGAACACGACCGCAAGACTTATCGCGCTATCTCACTTTCGCGC
ACGGCCAACTCGCATATTCTGCAAATGCGTGATGCCAATCAAAATGGCGCAGCCGGCGTCCAATGGGTCGGCTTCGGTAT
CCCGGCCTTTTGCCCGCACGTACCGTTTTTCACCAATGCAACCGATACGGATAAGAGTTATAGCGAGTTCCCAAAGAAGA
TGGATCTGAGCTCAGCTTATTGGCTCTATGAAGCGCTCGCGATGGTTGTCGAATCGCATTATGCTGAGTTCATCGAAGAC
GACTTAGCTTATCAAAAAGATCTCAATGAATGGGCACGTCGTAAAATTGCTGAAGTTGATCAAGCGGCCGCCGGGATGAG
TGGCGATGACTTAACCACGTATCTGACTGAACAAAATCATGCCATTGCCAAGCACTACAATGACACAACCCGTGATTTCC
TGTTCAAGCTCATCACAATGGGCACTAACTTATCGAAGCTCACCTTCAAGATGGATCCAAATCTATAG

Upstream 100 bases:

>100_bases
TTGAATCCAATGGCCAAGTTCGGGCCATTTGGATTCAAGCCCGCTTATGCTCCGGTTTCTAAACGCTCCTGCTCGCGCTC
AACTATTGGAGGAAATCAAC

Downstream 100 bases:

>100_bases
TCAAATTTACCAACATTCAAAAAGACATCGCCGCAGCAGTTCCTGCTAAAGCGATGTCTTTTTGAATGCCGCTTATTTGT
TAAAAAATTGCCGCTACAGC

Product: dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MIDRIEISACTSMMVGKKASLDGATYISRNEDRLVAIYPKRFVVQLAVTGRKETYVSPYNNLTVPLPESGYRYTSTPDAD
QSAGPNEEDGFNEKNVGESATESVYANERVLAYDPFIKNGLAEDSMTTLVLPFINSARDGVRYLGELVKKYGSAEGNGVQ
FNDQDEVWYMEIVTGHQWVAVRIPDDCYAVAANQIAIQDIDFNDPDNYMWADGIQDFVKDHNLNPDADHWNFRHIFGTDT
EKDHHYNTPRVWFAQRYLNPEIEQDPESAELPFIRKANRKISVEDIQYIMKSHFNETKFDPLGHGNEHDRKTYRAISLSR
TANSHILQMRDANQNGAAGVQWVGFGIPAFCPHVPFFTNATDTDKSYSEFPKKMDLSSAYWLYEALAMVVESHYAEFIED
DLAYQKDLNEWARRKIAEVDQAAAGMSGDDLTTYLTEQNHAIAKHYNDTTRDFLFKLITMGTNLSKLTFKMDPNL

Sequences:

>Translated_475_residues
MIDRIEISACTSMMVGKKASLDGATYISRNEDRLVAIYPKRFVVQLAVTGRKETYVSPYNNLTVPLPESGYRYTSTPDAD
QSAGPNEEDGFNEKNVGESATESVYANERVLAYDPFIKNGLAEDSMTTLVLPFINSARDGVRYLGELVKKYGSAEGNGVQ
FNDQDEVWYMEIVTGHQWVAVRIPDDCYAVAANQIAIQDIDFNDPDNYMWADGIQDFVKDHNLNPDADHWNFRHIFGTDT
EKDHHYNTPRVWFAQRYLNPEIEQDPESAELPFIRKANRKISVEDIQYIMKSHFNETKFDPLGHGNEHDRKTYRAISLSR
TANSHILQMRDANQNGAAGVQWVGFGIPAFCPHVPFFTNATDTDKSYSEFPKKMDLSSAYWLYEALAMVVESHYAEFIED
DLAYQKDLNEWARRKIAEVDQAAAGMSGDDLTTYLTEQNHAIAKHYNDTTRDFLFKLITMGTNLSKLTFKMDPNL
>Mature_475_residues
MIDRIEISACTSMMVGKKASLDGATYISRNEDRLVAIYPKRFVVQLAVTGRKETYVSPYNNLTVPLPESGYRYTSTPDAD
QSAGPNEEDGFNEKNVGESATESVYANERVLAYDPFIKNGLAEDSMTTLVLPFINSARDGVRYLGELVKKYGSAEGNGVQ
FNDQDEVWYMEIVTGHQWVAVRIPDDCYAVAANQIAIQDIDFNDPDNYMWADGIQDFVKDHNLNPDADHWNFRHIFGTDT
EKDHHYNTPRVWFAQRYLNPEIEQDPESAELPFIRKANRKISVEDIQYIMKSHFNETKFDPLGHGNEHDRKTYRAISLSR
TANSHILQMRDANQNGAAGVQWVGFGIPAFCPHVPFFTNATDTDKSYSEFPKKMDLSSAYWLYEALAMVVESHYAEFIED
DLAYQKDLNEWARRKIAEVDQAAAGMSGDDLTTYLTEQNHAIAKHYNDTTRDFLFKLITMGTNLSKLTFKMDPNL

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 54092; Mature: 54092

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRIEISACTSMMVGKKASLDGATYISRNEDRLVAIYPKRFVVQLAVTGRKETYVSPYN
CCCEEEHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCEEEEEEEECCCCCEEECCCC
NLTVPLPESGYRYTSTPDADQSAGPNEEDGFNEKNVGESATESVYANERVLAYDPFIKNG
CEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHCC
LAEDSMTTLVLPFINSARDGVRYLGELVKKYGSAEGNGVQFNDQDEVWYMEIVTGHQWVA
CCCCCHHEEEEHHHHCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEECCCEEEE
VRIPDDCYAVAANQIAIQDIDFNDPDNYMWADGIQDFVKDHNLNPDADHWNFRHIFGTDT
EEECCCHHHHHCCEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
EKDHHYNTPRVWFAQRYLNPEIEQDPESAELPFIRKANRKISVEDIQYIMKSHFNETKFD
CCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCHHHHCCCEECHHHHHHHHHHCCCCCCCC
PLGHGNEHDRKTYRAISLSRTANSHILQMRDANQNGAAGVQWVGFGIPAFCPHVPFFTNA
CCCCCCCHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCHHHCCCCCCCCCC
TDTDKSYSEFPKKMDLSSAYWLYEALAMVVESHYAEFIEDDLAYQKDLNEWARRKIAEVD
CCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAAGMSGDDLTTYLTEQNHAIAKHYNDTTRDFLFKLITMGTNLSKLTFKMDPNL
HHHCCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
>Mature Secondary Structure
MIDRIEISACTSMMVGKKASLDGATYISRNEDRLVAIYPKRFVVQLAVTGRKETYVSPYN
CCCEEEHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCEEEEEEEECCCCCEEECCCC
NLTVPLPESGYRYTSTPDADQSAGPNEEDGFNEKNVGESATESVYANERVLAYDPFIKNG
CEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHCC
LAEDSMTTLVLPFINSARDGVRYLGELVKKYGSAEGNGVQFNDQDEVWYMEIVTGHQWVA
CCCCCHHEEEEHHHHCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEECCCEEEE
VRIPDDCYAVAANQIAIQDIDFNDPDNYMWADGIQDFVKDHNLNPDADHWNFRHIFGTDT
EEECCCHHHHHCCEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
EKDHHYNTPRVWFAQRYLNPEIEQDPESAELPFIRKANRKISVEDIQYIMKSHFNETKFD
CCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCHHHHCCCEECHHHHHHHHHHCCCCCCCC
PLGHGNEHDRKTYRAISLSRTANSHILQMRDANQNGAAGVQWVGFGIPAFCPHVPFFTNA
CCCCCCCHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCHHHCCCCCCCCCC
TDTDKSYSEFPKKMDLSSAYWLYEALAMVVESHYAEFIEDDLAYQKDLNEWARRKIAEVD
CCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAAGMSGDDLTTYLTEQNHAIAKHYNDTTRDFLFKLITMGTNLSKLTFKMDPNL
HHHCCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA