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The map label for this gene is 116495541

Identifier: 116495541

GI number: 116495541

Start: 2067220

End: 2067966

Strand: Direct

Name: 116495541

Synonym: LSEI_2081

Alternate gene names: NA

Gene position: 2067220-2067966 (Clockwise)

Preceding gene: 116495540

Following gene: 116495544

Centisome position: 71.4

GC content: 49.53

Gene sequence:

>747_bases
ATGGAAACTTCAAATAATTTCGTTTGCGAAAACACGGAGCTAACGCACGGTTATCGGCTCAAAGATCATCATTACCAATG
CCGCTACTGTCCGGTCACATTTGCTGCGGATGAAGTCTATCCGCAAGATGGCCATTTTTTCACAGCTGAAGCCATGATCC
GTCAGCATGTCGCCCAAGTCCATCATGGCGCGCTTGCAGCGTTAGTGGCACAACCCGCTGGTCAACTTGGGGTGTCATCC
AGTCAACAGACAGTTTTACAGTTGTTCGCCCAAGGACTCAGTGATACTGTCATCGCGCAACGACTCAAAGTCTCGCCTTC
CACCATCCGCAACTACCGCTTTAAGTTCCGTGAAAAGGCGCAACAGGCACAACAATTTCTCGCCGCCATGACGCTGCTAG
CGATGCCAGACGCGTTGATCATCCCTCACGACGGTGCAAAAATGGTCGATGATCGATATGCGATCACGCCTGAGGAACGA
ACCAAGACACTCAAAAGTTTCATGGACGCTGATGGCCGCGTGACGAATTGGCCATCAAAAGAGAAACGCAAGCTCATTAT
TTTATCGGAAATTTTCAAAGGCTTCGATCCCCAGAAGAACTACTCGGAAACCGCGGTCAATGAAATTCTTAAGCAACACG
TTGAGGATTATGTCACGGTCCGGCGTAATTTGATTGAATACGGCTTTCTCGATCGAACCGCAGATGGCCGCACGTATTGG
GTCAAGGCTAGTGGTCCGCGAATTTAA

Upstream 100 bases:

>100_bases
AACGCTTCCGCGCAGGTAAAAAGTCATCAGCAAGCTCAAAACTTGCAGTTTCGCAAAATCCAAGTTAATATATAAACAAA
CATGAGAAAGGTTTGTTTAT

Downstream 100 bases:

>100_bases
AATGGCACGACAAATGTGCTCGCGGGCTATTCAAAAAAGAATTTAGAATAAAGATTCTGCGCCGTGCCAAACTCCGCAAT
CTCCGGCCAGACGGGGAGGC

Product: DNA-binding response regulator

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; Transcriptional Regulator ArsR Family; Transcriptional Regulator LuxR Family; Regulatory Protein LuxR; Transcriptional Regulator HTH Domain-Containing Protein; ArsR Family Transcriptional Regulator; Regulatory Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
METSNNFVCENTELTHGYRLKDHHYQCRYCPVTFAADEVYPQDGHFFTAEAMIRQHVAQVHHGALAALVAQPAGQLGVSS
SQQTVLQLFAQGLSDTVIAQRLKVSPSTIRNYRFKFREKAQQAQQFLAAMTLLAMPDALIIPHDGAKMVDDRYAITPEER
TKTLKSFMDADGRVTNWPSKEKRKLIILSEIFKGFDPQKNYSETAVNEILKQHVEDYVTVRRNLIEYGFLDRTADGRTYW
VKASGPRI

Sequences:

>Translated_248_residues
METSNNFVCENTELTHGYRLKDHHYQCRYCPVTFAADEVYPQDGHFFTAEAMIRQHVAQVHHGALAALVAQPAGQLGVSS
SQQTVLQLFAQGLSDTVIAQRLKVSPSTIRNYRFKFREKAQQAQQFLAAMTLLAMPDALIIPHDGAKMVDDRYAITPEER
TKTLKSFMDADGRVTNWPSKEKRKLIILSEIFKGFDPQKNYSETAVNEILKQHVEDYVTVRRNLIEYGFLDRTADGRTYW
VKASGPRI
>Mature_248_residues
METSNNFVCENTELTHGYRLKDHHYQCRYCPVTFAADEVYPQDGHFFTAEAMIRQHVAQVHHGALAALVAQPAGQLGVSS
SQQTVLQLFAQGLSDTVIAQRLKVSPSTIRNYRFKFREKAQQAQQFLAAMTLLAMPDALIIPHDGAKMVDDRYAITPEER
TKTLKSFMDADGRVTNWPSKEKRKLIILSEIFKGFDPQKNYSETAVNEILKQHVEDYVTVRRNLIEYGFLDRTADGRTYW
VKASGPRI

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28241; Mature: 28241

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSNNFVCENTELTHGYRLKDHHYQCRYCPVTFAADEVYPQDGHFFTAEAMIRQHVAQV
CCCCCCEEECCCCCCCCEEECCCCCEEEECCEEEECCCCCCCCCCEEHHHHHHHHHHHHH
HHGALAALVAQPAGQLGVSSSQQTVLQLFAQGLSDTVIAQRLKVSPSTIRNYRFKFREKA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
QQAQQFLAAMTLLAMPDALIIPHDGAKMVDDRYAITPEERTKTLKSFMDADGRVTNWPSK
HHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEECCCHHHHHHHHHHHCCCCCCCCCCCH
EKRKLIILSEIFKGFDPQKNYSETAVNEILKQHVEDYVTVRRNLIEYGFLDRTADGRTYW
HHHHEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
VKASGPRI
EECCCCCC
>Mature Secondary Structure
METSNNFVCENTELTHGYRLKDHHYQCRYCPVTFAADEVYPQDGHFFTAEAMIRQHVAQV
CCCCCCEEECCCCCCCCEEECCCCCEEEECCEEEECCCCCCCCCCEEHHHHHHHHHHHHH
HHGALAALVAQPAGQLGVSSSQQTVLQLFAQGLSDTVIAQRLKVSPSTIRNYRFKFREKA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
QQAQQFLAAMTLLAMPDALIIPHDGAKMVDDRYAITPEERTKTLKSFMDADGRVTNWPSK
HHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEECCCHHHHHHHHHHHCCCCCCCCCCCH
EKRKLIILSEIFKGFDPQKNYSETAVNEILKQHVEDYVTVRRNLIEYGFLDRTADGRTYW
HHHHEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
VKASGPRI
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA