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The map label for this gene is yaaA [C]

Identifier: 116495540

GI number: 116495540

Start: 2066200

End: 2066943

Strand: Direct

Name: yaaA [C]

Synonym: LSEI_2080

Alternate gene names: 116495540

Gene position: 2066200-2066943 (Clockwise)

Preceding gene: 116495539

Following gene: 116495541

Centisome position: 71.36

GC content: 49.33

Gene sequence:

>744_bases
ATGAAATTTATCATCGCTCCTGCAAAGAAAATGATCCGCGCTCAAGACGATTTCCCGGTCCAAAGCCAGCCCAAATACCG
TGCCCAAGCTGGCGAGCTGTTGCTGCTGATGCAACAATTGACCTTTTCTGAAGCGCAGGCGCTGTGGCATACCAGTGACA
AACTCACGCAAACCGCCTACAACCAACTGCAGCAAAGTGACCTGACTCGCCAACAGTCACCGGCCATCTTCAGCTATTCT
GGCATTCAATACCAATACATGGCCCCGGACTTGCTAGACGACGCCGGACTGGTGTACATTCAGCAACATCTTCGAATTTT
GTCAGGACTGTATGGCATTTTGCGTCCATTCGATGGCGTTGTGCCTTATCGCTTAGAAATGCAAAATCACTTACGTCTGC
CTCATCATCGCAATCTATATGACTTTTGGGGCAACCGCCTTTATCAGGCCTTAGCCAGAATGCCCGGCCCCATCATCAAC
CTCGCCTCTGACGAATATGCCAAAGCCATTCGTCCCTACTTGCAAGCAAAAGATCAATTCATAGATGTCCGTTTCGCCCA
TCGCGTTAACGGTCAACTAAAAACCCGTGCCACTTATGCCAAAATGGCCCGTGGTGAAATGATTCGTTTTGCCGCCAGCC
ATCGGTTAACCAAGGCGGCGGATTTGAAAAATTTTGATTCCCCGACTTATCGCTTCGATTCTCACCTTTCAACAGCAACA
CAACTGGTGTTCATCGCGAAGTGA

Upstream 100 bases:

>100_bases
CAGCACCGACGCTTGATCAAATAACCACGCAAAGTTAGACCATCTTGTTGTTCAAGCATGACCGTTTAATCTCAGCCGTT
AGAAAGTGAGTTTCGCTCGC

Downstream 100 bases:

>100_bases
GTCTTTATAAAAAGCTGGCCCAAATTGCCTTTGATGAGTATCACCATTGCCGACCCAGTCTCTTCTGGCCGGTAATGATG
TGAAGAATCAGCCATCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKFIIAPAKKMIRAQDDFPVQSQPKYRAQAGELLLLMQQLTFSEAQALWHTSDKLTQTAYNQLQQSDLTRQQSPAIFSYS
GIQYQYMAPDLLDDAGLVYIQQHLRILSGLYGILRPFDGVVPYRLEMQNHLRLPHHRNLYDFWGNRLYQALARMPGPIIN
LASDEYAKAIRPYLQAKDQFIDVRFAHRVNGQLKTRATYAKMARGEMIRFAASHRLTKAADLKNFDSPTYRFDSHLSTAT
QLVFIAK

Sequences:

>Translated_247_residues
MKFIIAPAKKMIRAQDDFPVQSQPKYRAQAGELLLLMQQLTFSEAQALWHTSDKLTQTAYNQLQQSDLTRQQSPAIFSYS
GIQYQYMAPDLLDDAGLVYIQQHLRILSGLYGILRPFDGVVPYRLEMQNHLRLPHHRNLYDFWGNRLYQALARMPGPIIN
LASDEYAKAIRPYLQAKDQFIDVRFAHRVNGQLKTRATYAKMARGEMIRFAASHRLTKAADLKNFDSPTYRFDSHLSTAT
QLVFIAK
>Mature_247_residues
MKFIIAPAKKMIRAQDDFPVQSQPKYRAQAGELLLLMQQLTFSEAQALWHTSDKLTQTAYNQLQQSDLTRQQSPAIFSYS
GIQYQYMAPDLLDDAGLVYIQQHLRILSGLYGILRPFDGVVPYRLEMQNHLRLPHHRNLYDFWGNRLYQALARMPGPIIN
LASDEYAKAIRPYLQAKDQFIDVRFAHRVNGQLKTRATYAKMARGEMIRFAASHRLTKAADLKNFDSPTYRFDSHLSTAT
QLVFIAK

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=258, Percent_Identity=36.046511627907, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2080_LACC3 (Q036P0)

Other databases:

- EMBL:   CP000423
- RefSeq:   YP_807274.1
- STRING:   Q036P0
- GeneID:   4420627
- GenomeReviews:   CP000423_GR
- KEGG:   lca:LSEI_2080
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   Q036P0
- ProtClustDB:   PRK02101
- BioCyc:   LCAS321967:LSEI_2080-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 28514; Mature: 28514

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIIAPAKKMIRAQDDFPVQSQPKYRAQAGELLLLMQQLTFSEAQALWHTSDKLTQTAY
CCEEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
NQLQQSDLTRQQSPAIFSYSGIQYQYMAPDLLDDAGLVYIQQHLRILSGLYGILRPFDGV
HHHHHHHHHHHCCCCEEEECCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VPYRLEMQNHLRLPHHRNLYDFWGNRLYQALARMPGPIINLASDEYAKAIRPYLQAKDQF
CCEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHH
IDVRFAHRVNGQLKTRATYAKMARGEMIRFAASHRLTKAADLKNFDSPTYRFDSHLSTAT
EEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH
QLVFIAK
HEEEEEC
>Mature Secondary Structure
MKFIIAPAKKMIRAQDDFPVQSQPKYRAQAGELLLLMQQLTFSEAQALWHTSDKLTQTAY
CCEEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
NQLQQSDLTRQQSPAIFSYSGIQYQYMAPDLLDDAGLVYIQQHLRILSGLYGILRPFDGV
HHHHHHHHHHHCCCCEEEECCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VPYRLEMQNHLRLPHHRNLYDFWGNRLYQALARMPGPIINLASDEYAKAIRPYLQAKDQF
CCEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHH
IDVRFAHRVNGQLKTRATYAKMARGEMIRFAASHRLTKAADLKNFDSPTYRFDSHLSTAT
EEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH
QLVFIAK
HEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA