| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is ilvE [H]
Identifier: 116495504
GI number: 116495504
Start: 2023934
End: 2024965
Strand: Direct
Name: ilvE [H]
Synonym: LSEI_2041
Alternate gene names: 116495504
Gene position: 2023934-2024965 (Clockwise)
Preceding gene: 116495497
Following gene: 116495507
Centisome position: 69.9
GC content: 49.22
Gene sequence:
>1032_bases ATGAGTGTCAATATTGATTGGAACAATCTAGGCTTCGATTATATGCAACTGCCATACCGTTATGTTGCCCACTGGAAAGA CGGGGCATGGGATGAAGGTAAGCTGTCCACCGATCCCAACCTGACGATGAATGAAGGCTCCCCGATTTTGCATTATGGTC AAGGCGCTTTTGAAGGTATGAAGGCATACCGGACCAAATCAGGAAAAATCCAACTTTTCCGGCCTGACCAAAATGCCCAT CGACTGCACAACTCTGCTGACAAGCTACTGATGCCGCCATTTCCTGAAGATCGCTTTATTGATGCGGTCAAGCAAGTCGT TGCCGCTAATCATGAATACGTACCGCCATATGGCACCGGTGCTACCTTATACTTACGCCCGATTTTGATTGGTGTCGGTC CCAATATCGGGGTTGCTCCGGCTAAGGAATACATTTTCGATGTCTTCGCCATGCCAGTTGGCCCCTACTTCAAAGGCGGC ATGGTGCCAACCAAGTTCATCGTTGCCGATCAATTCGACCGGGCGGCACATTACGGCACTGGCCAATCGAAAGTCGGCGG GAACTACGCCGCATCCCTGCAAGCCGGCAAATTCGCCCACGAGCACGGTTATGGCGATGCGATCTATCTGGACCCAATTG AACATAAATATATTGAAGAAGTTGGGTCAGCTAACTTCTTCGGCATTAGCAAAGATGGTAAAACTTTGAAAACACCGAAG TCACCATCCATCCTGCCAAGTATCACCAAGTATTCAATTTTGGCACTGGCGCATGATCGGTTTGGCATGACCACTGAAGA AACTAAGATTGCGATTACCGATTTGGATCAATTCGGTGAAGCCGGGGCCTGTGGCACTGCGGCGGTCATCACCCCGATTG CCAGCATCACCTACGAAGACCACGAACATGTCTTTTATTCGGAAACCAAAGTCGGTCCATATACACAAAAACTGTATGAT GAACTGACGGGTATCCAGTTTGGCGATGTACCGGCACCTGAAGGCTGGGTCGTTGACGTCCCGTTTAATTAA
Upstream 100 bases:
>100_bases TATTATTTAATGAAACCGCAATGTTCACGCAACGTTACTCTGAAATCAACCTCAGCCGGCTGTTTTCAGTCAGACGCACA CAAATACTGGAGGTACTGCC
Downstream 100 bases:
>100_bases TTTAAAAATCATTTATCACTCGGAAACTGTGAGAACTTGCACGCGCTATAACGCATCTGCAATCGCGTACGCCCGCTCAC GCTTCCACAAAAAAAGCAGC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSVNIDWNNLGFDYMQLPYRYVAHWKDGAWDEGKLSTDPNLTMNEGSPILHYGQGAFEGMKAYRTKSGKIQLFRPDQNAH RLHNSADKLLMPPFPEDRFIDAVKQVVAANHEYVPPYGTGATLYLRPILIGVGPNIGVAPAKEYIFDVFAMPVGPYFKGG MVPTKFIVADQFDRAAHYGTGQSKVGGNYAASLQAGKFAHEHGYGDAIYLDPIEHKYIEEVGSANFFGISKDGKTLKTPK SPSILPSITKYSILALAHDRFGMTTEETKIAITDLDQFGEAGACGTAAVITPIASITYEDHEHVFYSETKVGPYTQKLYD ELTGIQFGDVPAPEGWVVDVPFN
Sequences:
>Translated_343_residues MSVNIDWNNLGFDYMQLPYRYVAHWKDGAWDEGKLSTDPNLTMNEGSPILHYGQGAFEGMKAYRTKSGKIQLFRPDQNAH RLHNSADKLLMPPFPEDRFIDAVKQVVAANHEYVPPYGTGATLYLRPILIGVGPNIGVAPAKEYIFDVFAMPVGPYFKGG MVPTKFIVADQFDRAAHYGTGQSKVGGNYAASLQAGKFAHEHGYGDAIYLDPIEHKYIEEVGSANFFGISKDGKTLKTPK SPSILPSITKYSILALAHDRFGMTTEETKIAITDLDQFGEAGACGTAAVITPIASITYEDHEHVFYSETKVGPYTQKLYD ELTGIQFGDVPAPEGWVVDVPFN >Mature_342_residues SVNIDWNNLGFDYMQLPYRYVAHWKDGAWDEGKLSTDPNLTMNEGSPILHYGQGAFEGMKAYRTKSGKIQLFRPDQNAHR LHNSADKLLMPPFPEDRFIDAVKQVVAANHEYVPPYGTGATLYLRPILIGVGPNIGVAPAKEYIFDVFAMPVGPYFKGGM VPTKFIVADQFDRAAHYGTGQSKVGGNYAASLQAGKFAHEHGYGDAIYLDPIEHKYIEEVGSANFFGISKDGKTLKTPKS PSILPSITKYSILALAHDRFGMTTEETKIAITDLDQFGEAGACGTAAVITPIASITYEDHEHVFYSETKVGPYTQKLYDE LTGIQFGDVPAPEGWVVDVPFN
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010906, Length=336, Percent_Identity=33.9285714285714, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI38176287, Length=336, Percent_Identity=33.9285714285714, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI296010904, Length=336, Percent_Identity=33.9285714285714, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI50658084, Length=320, Percent_Identity=31.5625, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI258614015, Length=285, Percent_Identity=31.9298245614035, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI296010902, Length=270, Percent_Identity=33.7037037037037, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI296010900, Length=270, Percent_Identity=33.7037037037037, Blast_Score=124, Evalue=1e-28, Organism=Escherichia coli, GI48994963, Length=320, Percent_Identity=29.6875, Blast_Score=115, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17568601, Length=355, Percent_Identity=30.4225352112676, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17565728, Length=342, Percent_Identity=30.1169590643275, Blast_Score=124, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6322608, Length=332, Percent_Identity=31.9277108433735, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6322002, Length=307, Percent_Identity=31.5960912052117, Blast_Score=150, Evalue=2e-37, Organism=Drosophila melanogaster, GI24641779, Length=327, Percent_Identity=32.7217125382263, Blast_Score=165, Evalue=4e-41,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 37800; Mature: 37669
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNIDWNNLGFDYMQLPYRYVAHWKDGAWDEGKLSTDPNLTMNEGSPILHYGQGAFEGM CEEEEECCCCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHH KAYRTKSGKIQLFRPDQNAHRLHNSADKLLMPPFPEDRFIDAVKQVVAANHEYVPPYGTG HHHHCCCCCEEEECCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC ATLYLRPILIGVGPNIGVAPAKEYIFDVFAMPVGPYFKGGMVPTKFIVADQFDRAAHYGT CEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHCCC GQSKVGGNYAASLQAGKFAHEHGYGDAIYLDPIEHKYIEEVGSANFFGISKDGKTLKTPK CCCCCCCCEEEECCCCCCHHHCCCCCEEEECCHHHHHHHHHCCCCEEEECCCCCEECCCC SPSILPSITKYSILALAHDRFGMTTEETKIAITDLDQFGEAGACGTAAVITPIASITYED CCCCCCCHHHHEEEEEEHHHCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHEEECC HEHVFYSETKVGPYTQKLYDELTGIQFGDVPAPEGWVVDVPFN CCEEEEECCCCCHHHHHHHHHHHCCEECCCCCCCCEEEECCCC >Mature Secondary Structure SVNIDWNNLGFDYMQLPYRYVAHWKDGAWDEGKLSTDPNLTMNEGSPILHYGQGAFEGM EEEEECCCCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHH KAYRTKSGKIQLFRPDQNAHRLHNSADKLLMPPFPEDRFIDAVKQVVAANHEYVPPYGTG HHHHCCCCCEEEECCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC ATLYLRPILIGVGPNIGVAPAKEYIFDVFAMPVGPYFKGGMVPTKFIVADQFDRAAHYGT CEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHCCC GQSKVGGNYAASLQAGKFAHEHGYGDAIYLDPIEHKYIEEVGSANFFGISKDGKTLKTPK CCCCCCCCEEEECCCCCCHHHCCCCCEEEECCHHHHHHHHHCCCCEEEECCCCCEECCCC SPSILPSITKYSILALAHDRFGMTTEETKIAITDLDQFGEAGACGTAAVITPIASITYED CCCCCCCHHHHEEEEEEHHHCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHEEECC HEHVFYSETKVGPYTQKLYDELTGIQFGDVPAPEGWVVDVPFN CCEEEEECCCCCHHHHHHHHHHHCCEECCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]