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The map label for this gene is ywnB [H]

Identifier: 116495300

GI number: 116495300

Start: 1823377

End: 1824015

Strand: Direct

Name: ywnB [H]

Synonym: LSEI_1827

Alternate gene names: 116495300

Gene position: 1823377-1824015 (Clockwise)

Preceding gene: 116495294

Following gene: 116495301

Centisome position: 62.98

GC content: 46.17

Gene sequence:

>639_bases
ATGAAGATTGCGATTATTGGTGCCACAGGACATGCAGGTTCGGCTATTTTTAAGGAGGCCCTCAAACGAGGCCATGAAGT
GACCGGTTATGTTCGCCATCCAGATAAAAGTGTTGGAATCTTGCCACCGGATGCAGATCTGATTCAACAAGATGCGTTCA
CGTTGACGCGCGAGCAGTTGACGGGTTATGACGCTGTTATTGATGCTTTTGCGACAACTGTTGAGCAAGCTTATCTCCAC
ATTGATCTGGCCGACCACTTAATTCATGAGTTACGCAACACTGATAAGCCACGTGTGATTTTTATTCTCGGCGCAGGCAG
TCTAAAGAATGGCGACCAGACATTGTATGATACACTAAAAAAAGATCCACACGCTGCTGCTTTTATTAATACACCATTGA
ATCAATTTCGGGAACTGCAGTTGTTACGGTGGACCGATAATGTAAACTGGCTTGGTATTTCGCCAAGCGCTAACTTTCAG
CCTGGACCAGCTACAGCCTACGTACGTGGTAAAGACGAGCTGTTGAAAGATGATAGCGGCAAATCTGTCTTAAATAGCGA
CACACTTGCCGTTGCCTTGCTAGATGAGCTCGAAAACCCGACCATCAAACAAGCACGCTTCACAGCTCGCAATGCTTAA

Upstream 100 bases:

>100_bases
ATTGGCAGAATCATTTTCTAAGTTAAAATGATTGTCCATCTACTTTTTGTAAGTGTATCATGAAAAAGAAACGAATCGTC
ATGAAAGGATGTTGTTTTAG

Downstream 100 bases:

>100_bases
CCGCAACATTTTCTGGACATCACAGAGGAAGGGACATTTTGGCACAAGTAAAATTAACCATTCATTATGTTGATGAGACC
GGCAAGTCGCTTGGACCTGA

Product: putative NADH-flavin reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKIAIIGATGHAGSAIFKEALKRGHEVTGYVRHPDKSVGILPPDADLIQQDAFTLTREQLTGYDAVIDAFATTVEQAYLH
IDLADHLIHELRNTDKPRVIFILGAGSLKNGDQTLYDTLKKDPHAAAFINTPLNQFRELQLLRWTDNVNWLGISPSANFQ
PGPATAYVRGKDELLKDDSGKSVLNSDTLAVALLDELENPTIKQARFTARNA

Sequences:

>Translated_212_residues
MKIAIIGATGHAGSAIFKEALKRGHEVTGYVRHPDKSVGILPPDADLIQQDAFTLTREQLTGYDAVIDAFATTVEQAYLH
IDLADHLIHELRNTDKPRVIFILGAGSLKNGDQTLYDTLKKDPHAAAFINTPLNQFRELQLLRWTDNVNWLGISPSANFQ
PGPATAYVRGKDELLKDDSGKSVLNSDTLAVALLDELENPTIKQARFTARNA
>Mature_212_residues
MKIAIIGATGHAGSAIFKEALKRGHEVTGYVRHPDKSVGILPPDADLIQQDAFTLTREQLTGYDAVIDAFATTVEQAYLH
IDLADHLIHELRNTDKPRVIFILGAGSLKNGDQTLYDTLKKDPHAAAFINTPLNQFRELQLLRWTDNVNWLGISPSANFQ
PGPATAYVRGKDELLKDDSGKSVLNSDTLAVALLDELENPTIKQARFTARNA

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 23298; Mature: 23298

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIIGATGHAGSAIFKEALKRGHEVTGYVRHPDKSVGILPPDADLIQQDAFTLTREQL
CEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
TGYDAVIDAFATTVEQAYLHIDLADHLIHELRNTDKPRVIFILGAGSLKNGDQTLYDTLK
CCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH
KDPHAAAFINTPLNQFRELQLLRWTDNVNWLGISPSANFQPGPATAYVRGKDELLKDDSG
CCCCCEEEECCCHHHHHHEEEEEEECCCEEEEECCCCCCCCCCCEEEEECCHHHHCCCCC
KSVLNSDTLAVALLDELENPTIKQARFTARNA
CEECCCCHHHEEEHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKIAIIGATGHAGSAIFKEALKRGHEVTGYVRHPDKSVGILPPDADLIQQDAFTLTREQL
CEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
TGYDAVIDAFATTVEQAYLHIDLADHLIHELRNTDKPRVIFILGAGSLKNGDQTLYDTLK
CCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH
KDPHAAAFINTPLNQFRELQLLRWTDNVNWLGISPSANFQPGPATAYVRGKDELLKDDSG
CCCCCEEEECCCHHHHHHEEEEEEECCCEEEEECCCCCCCCCCCEEEEECCHHHHCCCCC
KSVLNSDTLAVALLDELENPTIKQARFTARNA
CEECCCCHHHEEEHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]