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The map label for this gene is 116495294

Identifier: 116495294

GI number: 116495294

Start: 1815407

End: 1816543

Strand: Direct

Name: 116495294

Synonym: LSEI_1818

Alternate gene names: NA

Gene position: 1815407-1816543 (Clockwise)

Preceding gene: 116495273

Following gene: 116495300

Centisome position: 62.7

GC content: 46.09

Gene sequence:

>1137_bases
ATGACCAGACCTTCAGCTGTTAATATTCATCGCACTAATCCACCAGACTGGTTTAAACAAGCGGATTTCGGTATCATCAT
TCACTGGGGACCCTATAGTGTGCCAGCTTACGCGCCAGTCAATATTCCTGATTACGGCACTTTAATCAAAACCAAATCAT
TAGGTTATTTGTTTGAACATCAACCTTATGCGGAGTGGTATGGCAACAGCATGTTATTGCCAAACAGCCCCGTAGCAGCC
TATCACCGGACGCATTATGGCAACACCTCTTATGCAGATTTCGCAAAAACGTTCAAACAGACCGCCCAGAATGTCGATGT
GCAGGCCTGGGCCGCAGCATTTGCCAATGCTGGCGCCAAATATGTCGTGATCGTTACAAAGCACCACGACGGTTTTGTCA
TGTTTGATCCGCACACCAATAACCCGTACGAACCTGACTATCATTTGAACTTCGACTTTGTCGGTGAACTGGCCCAAGCT
GTTCGCGCCCACGGAATGCGTTTTGGAACCTATTATTCATCTTTATTGGACTGGACTTTCCCGCATCTGCCAATCAAAGA
TTACGGCAGCTTTCTATTGGGCAACGACAAAAGCCAAACTTACAAAGATTATGTATGGCATCAGTGGCACGAATTGATTG
ATCGGTATCACCCAGATGTGCTTTGGAGCGATATCGGCTACCCAGATGATCACCGCTTGGAAACGCTGTTCAAGTATTAT
TATCAACAAGTCCCAGAAGGTTTAGTGAATGACCGCTGGCAACAATTTCCTGATTGGATGCGAACCAGTTGGATACGACC
TATTTTCAATCTCGTTGCGGCGCAGGTCATTAAACGTGACCAACATCACTCAGACGATCTCAGCGAGGTTAAGTACTATG
ACTACCGCACCCTTGAATATCGTACTGACTGGCCGCAAACAAATCGTTATTTCGAAATGACACGCGGCATGGACAAAAGT
TTTGGTTATAACCGCCTCAGTCGGCCAGAGGACTATATTACTGCAGATGACATCAAGCAATTGATCGCAGAGCTTAGGTC
TAAACGCGGTCGACTTTTACTCAATGTTGGTCCGGATATGAACGGCCAAATACCATCTGCCCAGCTCAGCATTCTTCAAC
AGTTAAGCAATAGGTAG

Upstream 100 bases:

>100_bases
AAATGATGCATCGATCAATCATTTAACTGGCAACACTTTTTCGACCTGAGCAGAAGTGACAGCTTTCGACGTGTATCATG
CTCTCAAGGAGACGATCTTC

Downstream 100 bases:

>100_bases
TGGCGTATCTAAAATCATGCCCAGTTTCCTCGTCATGATCATGCAAATCAAAAAGCACCTGACCGCACAAAAACGGTCAG
GTGCTTTTTCATGTCAGTAG

Product: Alpha-L-fucosidase

Products: L-fucose; alcohol

Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase; Alpha-L-Fucosidase Protein; Alpha-L-Fucosidase Family Protein; Glycoside Hydrolase Family Alpha-L-Fucosidase

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MTRPSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEHQPYAEWYGNSMLLPNSPVAA
YHRTHYGNTSYADFAKTFKQTAQNVDVQAWAAAFANAGAKYVVIVTKHHDGFVMFDPHTNNPYEPDYHLNFDFVGELAQA
VRAHGMRFGTYYSSLLDWTFPHLPIKDYGSFLLGNDKSQTYKDYVWHQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYY
YQQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEYRTDWPQTNRYFEMTRGMDKS
FGYNRLSRPEDYITADDIKQLIAELRSKRGRLLLNVGPDMNGQIPSAQLSILQQLSNR

Sequences:

>Translated_378_residues
MTRPSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEHQPYAEWYGNSMLLPNSPVAA
YHRTHYGNTSYADFAKTFKQTAQNVDVQAWAAAFANAGAKYVVIVTKHHDGFVMFDPHTNNPYEPDYHLNFDFVGELAQA
VRAHGMRFGTYYSSLLDWTFPHLPIKDYGSFLLGNDKSQTYKDYVWHQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYY
YQQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEYRTDWPQTNRYFEMTRGMDKS
FGYNRLSRPEDYITADDIKQLIAELRSKRGRLLLNVGPDMNGQIPSAQLSILQQLSNR
>Mature_377_residues
TRPSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEHQPYAEWYGNSMLLPNSPVAAY
HRTHYGNTSYADFAKTFKQTAQNVDVQAWAAAFANAGAKYVVIVTKHHDGFVMFDPHTNNPYEPDYHLNFDFVGELAQAV
RAHGMRFGTYYSSLLDWTFPHLPIKDYGSFLLGNDKSQTYKDYVWHQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYYY
QQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEYRTDWPQTNRYFEMTRGMDKSF
GYNRLSRPEDYITADDIKQLIAELRSKRGRLLLNVGPDMNGQIPSAQLSILQQLSNR

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40068512, Length=384, Percent_Identity=28.125, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI119360348, Length=363, Percent_Identity=30.0275482093664, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI71997700, Length=369, Percent_Identity=27.10027100271, Blast_Score=107, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24662717, Length=372, Percent_Identity=26.8817204301075, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI78706642, Length=372, Percent_Identity=26.8817204301075, Blast_Score=93, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.51

Molecular weight: Translated: 44392; Mature: 44261

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEH
CCCCCEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHCC
QPYAEWYGNSMLLPNSPVAAYHRTHYGNTSYADFAKTFKQTAQNVDVQAWAAAFANAGAK
CCHHHHCCCEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE
YVVIVTKHHDGFVMFDPHTNNPYEPDYHLNFDFVGELAQAVRAHGMRFGTYYSSLLDWTF
EEEEEEECCCCEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PHLPIKDYGSFLLGNDKSQTYKDYVWHQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYY
CCCCHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHH
YQQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEE
RTDWPQTNRYFEMTRGMDKSFGYNRLSRPEDYITADDIKQLIAELRSKRGRLLLNVGPDM
ECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
NGQIPSAQLSILQQLSNR
CCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRPSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEH
CCCCEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHCC
QPYAEWYGNSMLLPNSPVAAYHRTHYGNTSYADFAKTFKQTAQNVDVQAWAAAFANAGAK
CCHHHHCCCEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE
YVVIVTKHHDGFVMFDPHTNNPYEPDYHLNFDFVGELAQAVRAHGMRFGTYYSSLLDWTF
EEEEEEECCCCEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PHLPIKDYGSFLLGNDKSQTYKDYVWHQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYY
CCCCHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHH
YQQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEE
RTDWPQTNRYFEMTRGMDKSFGYNRLSRPEDYITADDIKQLIAELRSKRGRLLLNVGPDM
ECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
NGQIPSAQLSILQQLSNR
CCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; alpha-L-fucoside

Specific reaction: H2O + an alpha-L-fucoside = L-fucose + an alcohol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA