| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is mhqD [H]
Identifier: 116495175
GI number: 116495175
Start: 1689228
End: 1689869
Strand: Direct
Name: mhqD [H]
Synonym: LSEI_1694
Alternate gene names: 116495175
Gene position: 1689228-1689869 (Clockwise)
Preceding gene: 116495174
Following gene: 116495176
Centisome position: 58.34
GC content: 45.95
Gene sequence:
>642_bases ATGGCAGAAGATAAAGTAAACTACGCATTTGTTAAAGGTGATCCAACTGTCTCACCATTACTATTACTGCATGGCCAAGG CGGCGATGAAAATGACTTACTGCCAATTGGCAAGTACCTCTCGCCAAATAGTCCCATGTTGTCGATTCGCGGTCGCGTGC AAGAACAAGGCATGAACCGCTACTTCAAGCACACGGAAAATGGCGGCTTTGATTTAAACGATCTTGAACAGGAGACCACT TGGCTATTTTCAGTGTTAAATGACCTTTGCCGGAAATTTGACATCAACTATGAGCGATTTATCGTGATCGGCTATTCTAA CGGCGCTAACGTTGCTGCACGGGCGCTATTGACGCGAAGTGATACATTCCACACAGGCATTTTCTTCCACCCGATGGCAC TTTCGACAGTCGATTCAAAACAAGATCTTAGCGATGTCAAAGTCTGGATGTCACATGGCGATCAAGATCCGATTGTGCCA GCACAAAACTTCAAAGTGCTCGATATGTACCTTGAAGAGCAAGGTGCCGATGTCACGATTTTCCGTCATGGGCAAAGTCA CAATTTGAATGAAGAAGAATTGACAAACGCCAAAAGCTGGCTGGCAAAAAGTGGTCGGTTAGCTGATTGGCGACGGAGGT GA
Upstream 100 bases:
>100_bases AGAGTTGCCACCATTCTTGGAAAGCAAACGCGAAGAAATTGAAAAGCAATTAATCCCAGTCAAAACCGACTGGCGCGGAC GTTAATGATTGGAGGTTGCG
Downstream 100 bases:
>100_bases AAGGCTATGCAACGTTTTGGTTTTGAACAGTATGGTGATCCGAGCGTTTTTGAAACCATTGAGGCGCCGATTCCCGAACC AAAAACTGGCCAAGTACAAT
Product: esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAEDKVNYAFVKGDPTVSPLLLLHGQGGDENDLLPIGKYLSPNSPMLSIRGRVQEQGMNRYFKHTENGGFDLNDLEQETT WLFSVLNDLCRKFDINYERFIVIGYSNGANVAARALLTRSDTFHTGIFFHPMALSTVDSKQDLSDVKVWMSHGDQDPIVP AQNFKVLDMYLEEQGADVTIFRHGQSHNLNEEELTNAKSWLAKSGRLADWRRR
Sequences:
>Translated_213_residues MAEDKVNYAFVKGDPTVSPLLLLHGQGGDENDLLPIGKYLSPNSPMLSIRGRVQEQGMNRYFKHTENGGFDLNDLEQETT WLFSVLNDLCRKFDINYERFIVIGYSNGANVAARALLTRSDTFHTGIFFHPMALSTVDSKQDLSDVKVWMSHGDQDPIVP AQNFKVLDMYLEEQGADVTIFRHGQSHNLNEEELTNAKSWLAKSGRLADWRRR >Mature_212_residues AEDKVNYAFVKGDPTVSPLLLLHGQGGDENDLLPIGKYLSPNSPMLSIRGRVQEQGMNRYFKHTENGGFDLNDLEQETTW LFSVLNDLCRKFDINYERFIVIGYSNGANVAARALLTRSDTFHTGIFFHPMALSTVDSKQDLSDVKVWMSHGDQDPIVPA QNFKVLDMYLEEQGADVTIFRHGQSHNLNEEELTNAKSWLAKSGRLADWRRR
Specific function: Putative hydrolase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003140 [H]
Pfam domain/function: PF02230 Abhydrolase_2 [H]
EC number: NA
Molecular weight: Translated: 24193; Mature: 24062
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDKVNYAFVKGDPTVSPLLLLHGQGGDENDLLPIGKYLSPNSPMLSIRGRVQEQGMNR CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHHH YFKHTENGGFDLNDLEQETTWLFSVLNDLCRKFDINYERFIVIGYSNGANVAARALLTRS HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCC DTFHTGIFFHPMALSTVDSKQDLSDVKVWMSHGDQDPIVPAQNFKVLDMYLEEQGADVTI CCCCCCEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCEEEE FRHGQSHNLNEEELTNAKSWLAKSGRLADWRRR EECCCCCCCCHHHHHHHHHHHHCCCCCCHHCCC >Mature Secondary Structure AEDKVNYAFVKGDPTVSPLLLLHGQGGDENDLLPIGKYLSPNSPMLSIRGRVQEQGMNR CCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHHH YFKHTENGGFDLNDLEQETTWLFSVLNDLCRKFDINYERFIVIGYSNGANVAARALLTRS HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCC DTFHTGIFFHPMALSTVDSKQDLSDVKVWMSHGDQDPIVPAQNFKVLDMYLEEQGADVTI CCCCCCEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCEEEE FRHGQSHNLNEEELTNAKSWLAKSGRLADWRRR EECCCCCCCCHHHHHHHHHHHHCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]