Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is lacX [H]

Identifier: 116494892

GI number: 116494892

Start: 1394172

End: 1395050

Strand: Direct

Name: lacX [H]

Synonym: LSEI_1406

Alternate gene names: 116494892

Gene position: 1394172-1395050 (Clockwise)

Preceding gene: 116494891

Following gene: 116494894

Centisome position: 48.15

GC content: 49.49

Gene sequence:

>879_bases
ATGGTAACGATTGCAAATGACTTTTTGACAGTTAAAATCAGTCGGCATGGTGCTGAACTGACCAGTATCAAAGATAACCT
GACAGGCAGGGAGCGTCTGTGGCAAGCAGATCCTGCGGTGTGGGGTCGCCACGCCCCGGTCTTGTTCCCGATTGTTGGGG
CGCTGGCTGACAATCAATATCATTACGCAGGCAAGACTTACCACATGGGCCAGCACGGTTTTGCCCGTGATCGTGATTTC
ACGGTGCTCTCTGCGACACCGTTTAAAGCGAGCTTCGTTCTGAAGGATGATGACAAAACGCGGGCGATGTACCCGTTCGC
TTTTCGTTTAATCATCACGTTTGCACTAGAAAATAACAATCTACATGTCACGTATCACGTTGACAATCCGGACAAAAGTG
AGCCACTGTTCTTTAGCATCGGCGGCCATCCGGGCTTCAAGGTCCCAATGACGCCGGATACTCAATTCTCCGATTATTAT
TTGAACTTCAAACCGCGTAAGTCGCTTGTTCAGATTCCATTGGTTGCTGGTGAAGGCATTGATTACACGCACCGGACCTT
GGCTGCAACTGATGCCAATTTGGCCTTAACGCACGAAACATTTGATCATGATGCTTTAATTTTCGCGTTGCTTGGTAAGA
CAACCTTCAACTTGGTTTCTGACAAGACGAAACATGGTGTCAGCGTTACCATGACCGATACCCCATATCTGGGCGTTTGG
AGTCCGTATCCAACCACTGGCGACTTTGTCTGCATCGAACCTTGGTGGGGCATCGCCGACACGATTGGCAGCACTGGCGA
CCTGACGCGCAAACTCGGGATCAATCGACTTGAACCTGGCACGGCATTTGAGAAGGGTTACATGATCAGCATTTTCTAA

Upstream 100 bases:

>100_bases
AATATGTGGATGACAAGATTGGCCATATTGCGGCTGATTCAAACATGACGCGGTATATTTTGTAGTTAACAATAATGTTG
TAGGTAAAGGATGAGGATGT

Downstream 100 bases:

>100_bases
GGTGTCATCAGTTTGTCGATTAGGTACATGAAAAAAAGACATCCAGTTTCGGATGTCTTTTTGGTTGCCATCAAAAGGTG
ACTAAGAGCGGCCCCGGTGT

Product: galactose mutarotase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MVTIANDFLTVKISRHGAELTSIKDNLTGRERLWQADPAVWGRHAPVLFPIVGALADNQYHYAGKTYHMGQHGFARDRDF
TVLSATPFKASFVLKDDDKTRAMYPFAFRLIITFALENNNLHVTYHVDNPDKSEPLFFSIGGHPGFKVPMTPDTQFSDYY
LNFKPRKSLVQIPLVAGEGIDYTHRTLAATDANLALTHETFDHDALIFALLGKTTFNLVSDKTKHGVSVTMTDTPYLGVW
SPYPTTGDFVCIEPWWGIADTIGSTGDLTRKLGINRLEPGTAFEKGYMISIF

Sequences:

>Translated_292_residues
MVTIANDFLTVKISRHGAELTSIKDNLTGRERLWQADPAVWGRHAPVLFPIVGALADNQYHYAGKTYHMGQHGFARDRDF
TVLSATPFKASFVLKDDDKTRAMYPFAFRLIITFALENNNLHVTYHVDNPDKSEPLFFSIGGHPGFKVPMTPDTQFSDYY
LNFKPRKSLVQIPLVAGEGIDYTHRTLAATDANLALTHETFDHDALIFALLGKTTFNLVSDKTKHGVSVTMTDTPYLGVW
SPYPTTGDFVCIEPWWGIADTIGSTGDLTRKLGINRLEPGTAFEKGYMISIF
>Mature_292_residues
MVTIANDFLTVKISRHGAELTSIKDNLTGRERLWQADPAVWGRHAPVLFPIVGALADNQYHYAGKTYHMGQHGFARDRDF
TVLSATPFKASFVLKDDDKTRAMYPFAFRLIITFALENNNLHVTYHVDNPDKSEPLFFSIGGHPGFKVPMTPDTQFSDYY
LNFKPRKSLVQIPLVAGEGIDYTHRTLAATDANLALTHETFDHDALIFALLGKTTFNLVSDKTKHGVSVTMTDTPYLGVW
SPYPTTGDFVCIEPWWGIADTIGSTGDLTRKLGINRLEPGTAFEKGYMISIF

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 32653; Mature: 32653

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTIANDFLTVKISRHGAELTSIKDNLTGRERLWQADPAVWGRHAPVLFPIVGALADNQY
CEEEECCEEEEEEECCCCEEEHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCE
HYAGKTYHMGQHGFARDRDFTVLSATPFKASFVLKDDDKTRAMYPFAFRLIITFALENNN
EECCCEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEECCEEEEEEEEEEEECCC
LHVTYHVDNPDKSEPLFFSIGGHPGFKVPMTPDTQFSDYYLNFKPRKSLVQIPLVAGEGI
EEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEEEECCCC
DYTHRTLAATDANLALTHETFDHDALIFALLGKTTFNLVSDKTKHGVSVTMTDTPYLGVW
CCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEHHCCCCCCCEEEEEECCCEEECC
SPYPTTGDFVCIEPWWGIADTIGSTGDLTRKLGINRLEPGTAFEKGYMISIF
CCCCCCCCEEEECCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MVTIANDFLTVKISRHGAELTSIKDNLTGRERLWQADPAVWGRHAPVLFPIVGALADNQY
CEEEECCEEEEEEECCCCEEEHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCE
HYAGKTYHMGQHGFARDRDFTVLSATPFKASFVLKDDDKTRAMYPFAFRLIITFALENNN
EECCCEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEECCEEEEEEEEEEEECCC
LHVTYHVDNPDKSEPLFFSIGGHPGFKVPMTPDTQFSDYYLNFKPRKSLVQIPLVAGEGI
EEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEEEECCCC
DYTHRTLAATDANLALTHETFDHDALIFALLGKTTFNLVSDKTKHGVSVTMTDTPYLGVW
CCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEHHCCCCCCCEEEEEECCCEEECC
SPYPTTGDFVCIEPWWGIADTIGSTGDLTRKLGINRLEPGTAFEKGYMISIF
CCCCCCCCEEEECCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339371 [H]