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The map label for this gene is ypmS [H]

Identifier: 116494878

GI number: 116494878

Start: 1380931

End: 1381560

Strand: Direct

Name: ypmS [H]

Synonym: LSEI_1392

Alternate gene names: 116494878

Gene position: 1380931-1381560 (Clockwise)

Preceding gene: 116494877

Following gene: 116494879

Centisome position: 47.7

GC content: 42.86

Gene sequence:

>630_bases
GTGACAGAAAAGAAACGGCAGCGCAAACAAAAATCGATCAGCTGGTCAATGATTAACTGGTGGAAATGGGCATTTTTAAT
CCTGATTGGCCTTATCTTGGGTAGCGGAATTTGGTTTACCAAAACCGTCTTAGCGCCGGTTTCACTGAACACAGCCACAG
AGACTAAGACGATTTCAAACGACCCGGTTTTCACGGTTAAAGTCACCAAGAGTAGTGCCAACCGAATCATGGCACATTAT
TTAAAAACCTATCTGAAGGACAGCCCAATTAAATACGCCGTCACCCTTGGCAATAATGAGGCGGCGTTGAATGGTTCGTT
CAAATTTCTTGGCAATAATGTCAAGTTCCAATTGACCTTTGATCCGTTGGTACTTAAAAATGGCGATGTTTTGCTAAAGT
CAAAGAAATTGAACGTCGGTACATTGCCAGTCCCGATTAGTTTCGTAATGAGCTATATTGGGCATAGTTATAAAATCCCT
AGCTGGGTCAGTCTTGATAGTAAGGCAGGAAACGTTGTGCTAAAATTGAGCCAATTTAAACTCCAAAATGGCATGACGCT
TCGGGCCACTAAACTAGATCCGACGAACGATGACTTAGAGTTCGCAGTTTACCTCCCGGATAATCAGTGA

Upstream 100 bases:

>100_bases
CGCAAGATCATTTTCATCCTAATAATGCCGGTTATGCGCAAATGACTAAACAATTGATGACGAAACTAACAGCCACAAAG
AAAGATTGGGAGTGATTAGG

Downstream 100 bases:

>100_bases
TCATTGGAAAGAAGCTGAATATTTTATGAAAAAAGAAACAGCTATTTTTGCTGGGGGATGTTTTTGGTGTATGGTTGAAC
CCTTTGAAGAGCAGCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTEKKRQRKQKSISWSMINWWKWAFLILIGLILGSGIWFTKTVLAPVSLNTATETKTISNDPVFTVKVTKSSANRIMAHY
LKTYLKDSPIKYAVTLGNNEAALNGSFKFLGNNVKFQLTFDPLVLKNGDVLLKSKKLNVGTLPVPISFVMSYIGHSYKIP
SWVSLDSKAGNVVLKLSQFKLQNGMTLRATKLDPTNDDLEFAVYLPDNQ

Sequences:

>Translated_209_residues
MTEKKRQRKQKSISWSMINWWKWAFLILIGLILGSGIWFTKTVLAPVSLNTATETKTISNDPVFTVKVTKSSANRIMAHY
LKTYLKDSPIKYAVTLGNNEAALNGSFKFLGNNVKFQLTFDPLVLKNGDVLLKSKKLNVGTLPVPISFVMSYIGHSYKIP
SWVSLDSKAGNVVLKLSQFKLQNGMTLRATKLDPTNDDLEFAVYLPDNQ
>Mature_208_residues
TEKKRQRKQKSISWSMINWWKWAFLILIGLILGSGIWFTKTVLAPVSLNTATETKTISNDPVFTVKVTKSSANRIMAHYL
KTYLKDSPIKYAVTLGNNEAALNGSFKFLGNNVKFQLTFDPLVLKNGDVLLKSKKLNVGTLPVPISFVMSYIGHSYKIPS
WVSLDSKAGNVVLKLSQFKLQNGMTLRATKLDPTNDDLEFAVYLPDNQ

Specific function: Unknown

COG id: COG4698

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018672 [H]

Pfam domain/function: PF09911 DUF2140 [H]

EC number: NA

Molecular weight: Translated: 23477; Mature: 23345

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKKRQRKQKSISWSMINWWKWAFLILIGLILGSGIWFTKTVLAPVSLNTATETKTISN
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEEEEECCCCCCCEECCC
DPVFTVKVTKSSANRIMAHYLKTYLKDSPIKYAVTLGNNEAALNGSFKFLGNNVKFQLTF
CCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCEEEEECCCEEEEEEE
DPLVLKNGDVLLKSKKLNVGTLPVPISFVMSYIGHSYKIPSWVSLDSKAGNVVLKLSQFK
CCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEE
LQNGMTLRATKLDPTNDDLEFAVYLPDNQ
CCCCCEEEEEECCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
TEKKRQRKQKSISWSMINWWKWAFLILIGLILGSGIWFTKTVLAPVSLNTATETKTISN
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEEEEECCCCCCCEECCC
DPVFTVKVTKSSANRIMAHYLKTYLKDSPIKYAVTLGNNEAALNGSFKFLGNNVKFQLTF
CCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCEEEEECCCEEEEEEE
DPLVLKNGDVLLKSKKLNVGTLPVPISFVMSYIGHSYKIPSWVSLDSKAGNVVLKLSQFK
CCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEE
LQNGMTLRATKLDPTNDDLEFAVYLPDNQ
CCCCCEEEEEECCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]