Click here to switch to the map view.

The map label for this gene is 116494871

Identifier: 116494871

GI number: 116494871

Start: 1373861

End: 1374316

Strand: Direct

Name: 116494871

Synonym: LSEI_1385

Alternate gene names: NA

Gene position: 1373861-1374316 (Clockwise)

Preceding gene: 116494870

Following gene: 116494872

Centisome position: 47.45

GC content: 44.74

Gene sequence:

>456_bases
ATGGCAGAACATGTTTTTGAGCAATTGATTTTTCATTTTCGTAACGGTGACGAATGGACTGTTGAGCATGATGAACTGGC
GGACGTCTGGATCAGTCGAGTAACCACAAGTTACGGACGCATTCACGGCGGTCAGATTCAAGAGATTCATCCTTGCAAGA
GCTTTAAGGTTGAGATTTTGCCTGAAGCTGACCACGTCAAGTCAAGCGATATCAACACCGGTTCGCTGGAGATGGGGATG
TTTGGTCGCGCCACTAAGTATCAAGATATTGAAAAGATGGACTTGGTCTTCAATGCGGAAGACAAAAAGCGCGTTCAAAT
CTACTTCCCATTCAAGCAAAAGGATCCAAGCGGGCTTGATAACGAGTACCAGAGTAGCAAGCTTGCAGCAAACGGTCATC
TTTATATTGTGATCGATGAAAAACATACCGTGGATGATGAATATCCGCGGATCTAA

Upstream 100 bases:

>100_bases
TCAAACAGGACGATTGATCAGCTGGGCGGCTTTAAAATAGCATAGTTGGCCACCAGTGCGTTTCCAACCCGTTCTGCATG
ACAGTGAAGGGGGATTTCCA

Downstream 100 bases:

>100_bases
TCGTGATCACGTACGGGTCGGCATTGATGTCGGCCTTTTCTTGTGCGCTGCTTCTTGCTAAGATGGACAACGATACGAGT
GAAATGAGGGACAACATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAEHVFEQLIFHFRNGDEWTVEHDELADVWISRVTTSYGRIHGGQIQEIHPCKSFKVEILPEADHVKSSDINTGSLEMGM
FGRATKYQDIEKMDLVFNAEDKKRVQIYFPFKQKDPSGLDNEYQSSKLAANGHLYIVIDEKHTVDDEYPRI

Sequences:

>Translated_151_residues
MAEHVFEQLIFHFRNGDEWTVEHDELADVWISRVTTSYGRIHGGQIQEIHPCKSFKVEILPEADHVKSSDINTGSLEMGM
FGRATKYQDIEKMDLVFNAEDKKRVQIYFPFKQKDPSGLDNEYQSSKLAANGHLYIVIDEKHTVDDEYPRI
>Mature_150_residues
AEHVFEQLIFHFRNGDEWTVEHDELADVWISRVTTSYGRIHGGQIQEIHPCKSFKVEILPEADHVKSSDINTGSLEMGMF
GRATKYQDIEKMDLVFNAEDKKRVQIYFPFKQKDPSGLDNEYQSSKLAANGHLYIVIDEKHTVDDEYPRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17532; Mature: 17401

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEHVFEQLIFHFRNGDEWTVEHDELADVWISRVTTSYGRIHGGQIQEIHPCKSFKVEIL
CHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEE
PEADHVKSSDINTGSLEMGMFGRATKYQDIEKMDLVFNAEDKKRVQIYFPFKQKDPSGLD
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCC
NEYQSSKLAANGHLYIVIDEKHTVDDEYPRI
CCCCCCEEECCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AEHVFEQLIFHFRNGDEWTVEHDELADVWISRVTTSYGRIHGGQIQEIHPCKSFKVEIL
HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEE
PEADHVKSSDINTGSLEMGMFGRATKYQDIEKMDLVFNAEDKKRVQIYFPFKQKDPSGLD
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCC
NEYQSSKLAANGHLYIVIDEKHTVDDEYPRI
CCCCCCEEECCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA