| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is engA
Identifier: 116494866
GI number: 116494866
Start: 1368195
End: 1369502
Strand: Direct
Name: engA
Synonym: LSEI_1380
Alternate gene names: 116494866
Gene position: 1368195-1369502 (Clockwise)
Preceding gene: 116494865
Following gene: 116494867
Centisome position: 47.26
GC content: 46.1
Gene sequence:
>1308_bases ATGGTCTTACCAACATTAGCAATCGTTGGCCGTCCGAATGTGGGCAAGTCAACCATTTTTAACCGTATTCTCGGTGAGCG GGTTTCGATTGTGGAAGATACGCCCGGGGTCACGCGTGATCGCATCTATGGCAAGAGTGAATGGCTTGGTAAAGAATTTG CTGTCATTGACACCGGTGGGATCGACTTAGGCGATGAACCTTTTTTGGCGCAAATTAAGGATCAAGCTGAAATTGCCATC GATGAAGCCGATGTCATCCTTTTTCTCGCTGATATTGAAAGCGGGGTAACTGATGCAGATGAACGGGTAGCCCAGATTCT TTATCGGGCTAAAAAGCCGGTCGTACTGGCAGTCAATAAGGTTGATAACCCTGAACGTCGCCAAGATATTTACGATTTTT ATTCATTAGGTTTTGGCGAACCCTATCCACTTTCTGGGACCCATGGGATTGGCCTTGGTGATGTTTTGGATGCTGTTTTA GCAGCATTTCCATCCGAAGATAAGTCAGTTGAAGACGATTCGATTAAGTTCAGCCTGATTGGTCGGCCAAATGTCGGTAA ATCGTCTTTAGTTAACGCCATTCTTGGTGAAAATCGGGTCATCGTGAGTCCAATCGAAGGCACGACCCGCGATGCGATTG ATACGAAGTTCGAAGCAGTTGACGAAACCTTCACGATGATTGACACGGCTGGGATTCGTAAACGTGGTAAGGTTTACGAG AACACCGAAAAATACGCGGTCATGCGTGCATTACGAGCGATTGATCGTTCGGATGTTGTTTTGTTTGTCATCAACGCCGA AGAAGGTATCCGCGAACAGGATAAAAAGGTCGCCGGTTATGCCCACGAGGCCGGTCGTGGCATCATCATCGTCGTCAACA AGTGGGATACAGTTGAGAAAGATAATCACACGATGAAGGATTTTGAAAACCTGATTCGTCAGGAATTCCAATATCTGGAT TATGCGCCGATTATTTTTGTTTCTGCCAAGACGAAACAGCGTTTACAGAGCTTGCCAGCCATGATTGTGGCAGTTTCAGA AAATCAAACTCGGCGAATTCAAAGCAGTGTCCTAAATGATGTCTTAATGGATGCCATTACTGTTACACCGACACCGACAG TTAACGGAAAACGCTTGCGGATTTATTACATGACCCAAGTTGCTGTCAAACCGCCAACTTTCGTGGTTTTTGTTAATGAT CCCGACCTGCTGCACTTCTCGTACGAGCGATTCCTGATTAACCAATTGCGACAGGCCTTTGATTTTTCCGGTACACCGAT TCACATCATCGCACGTAAACGCAAGTAG
Upstream 100 bases:
>100_bases ATAACAAGTAGTCATCTTGAACCTAAAAAGTTGAGCCTTGGCTCAACTTTTTTTATGGGAAACAAATCCCATGACGCCGT CACAGAAAGGAGGCCGTTTT
Downstream 100 bases:
>100_bases TTCGGCGATGGCTGAATATTGTCTTTTCATTTAAAAAAATATGTCAAAAATCGTGATTTTCGATAACCGATCCTTGATCA GACAGCAAAAAGTTTGGCAA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MVLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGGIDLGDEPFLAQIKDQAEIAI DEADVILFLADIESGVTDADERVAQILYRAKKPVVLAVNKVDNPERRQDIYDFYSLGFGEPYPLSGTHGIGLGDVLDAVL AAFPSEDKSVEDDSIKFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKRGKVYE NTEKYAVMRALRAIDRSDVVLFVINAEEGIREQDKKVAGYAHEAGRGIIIVVNKWDTVEKDNHTMKDFENLIRQEFQYLD YAPIIFVSAKTKQRLQSLPAMIVAVSENQTRRIQSSVLNDVLMDAITVTPTPTVNGKRLRIYYMTQVAVKPPTFVVFVND PDLLHFSYERFLINQLRQAFDFSGTPIHIIARKRK
Sequences:
>Translated_435_residues MVLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGGIDLGDEPFLAQIKDQAEIAI DEADVILFLADIESGVTDADERVAQILYRAKKPVVLAVNKVDNPERRQDIYDFYSLGFGEPYPLSGTHGIGLGDVLDAVL AAFPSEDKSVEDDSIKFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKRGKVYE NTEKYAVMRALRAIDRSDVVLFVINAEEGIREQDKKVAGYAHEAGRGIIIVVNKWDTVEKDNHTMKDFENLIRQEFQYLD YAPIIFVSAKTKQRLQSLPAMIVAVSENQTRRIQSSVLNDVLMDAITVTPTPTVNGKRLRIYYMTQVAVKPPTFVVFVND PDLLHFSYERFLINQLRQAFDFSGTPIHIIARKRK >Mature_435_residues MVLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGGIDLGDEPFLAQIKDQAEIAI DEADVILFLADIESGVTDADERVAQILYRAKKPVVLAVNKVDNPERRQDIYDFYSLGFGEPYPLSGTHGIGLGDVLDAVL AAFPSEDKSVEDDSIKFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKRGKVYE NTEKYAVMRALRAIDRSDVVLFVINAEEGIREQDKKVAGYAHEAGRGIIIVVNKWDTVEKDNHTMKDFENLIRQEFQYLD YAPIIFVSAKTKQRLQSLPAMIVAVSENQTRRIQSSVLNDVLMDAITVTPTPTVNGKRLRIYYMTQVAVKPPTFVVFVND PDLLHFSYERFLINQLRQAFDFSGTPIHIIARKRK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=459, Percent_Identity=38.1263616557734, Blast_Score=321, Evalue=7e-89, Organism=Escherichia coli, GI1788919, Length=176, Percent_Identity=30.1136363636364, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI2367268, Length=111, Percent_Identity=36.9369369369369, Blast_Score=68, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6323665, Length=212, Percent_Identity=32.0754716981132, Blast_Score=86, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_LACC3 (Q039G4)
Other databases:
- EMBL: CP000423 - RefSeq: YP_806600.1 - ProteinModelPortal: Q039G4 - SMR: Q039G4 - STRING: Q039G4 - GeneID: 4419799 - GenomeReviews: CP000423_GR - KEGG: lca:LSEI_1380 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q039G4 - ProtClustDB: PRK00093 - BioCyc: LCAS321967:LSEI_1380-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 48612; Mature: 48612
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGG CCCCCEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHCCCCHHHCCCEEEEEECCC IDLGDEPFLAQIKDQAEIAIDEADVILFLADIESGVTDADERVAQILYRAKKPVVLAVNK CCCCCCCHHHHHCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEC VDNPERRQDIYDFYSLGFGEPYPLSGTHGIGLGDVLDAVLAAFPSEDKSVEDDSIKFSLI CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE GRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKRGKVYE CCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NTEKYAVMRALRAIDRSDVVLFVINAEEGIREQDKKVAGYAHEAGRGIIIVVNKWDTVEK CHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCHHHCCCEEEEEEECCCCCCC DNHTMKDFENLIRQEFQYLDYAPIIFVSAKTKQRLQSLPAMIVAVSENQTRRIQSSVLND CCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH VLMDAITVTPTPTVNGKRLRIYYMTQVAVKPPTFVVFVNDPDLLHFSYERFLINQLRQAF HHHHHEEECCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCEEEHHHHHHHHHHHHHHH DFSGTPIHIIARKRK CCCCCEEEEEEECCC >Mature Secondary Structure MVLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGG CCCCCEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHCCCCHHHCCCEEEEEECCC IDLGDEPFLAQIKDQAEIAIDEADVILFLADIESGVTDADERVAQILYRAKKPVVLAVNK CCCCCCCHHHHHCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEC VDNPERRQDIYDFYSLGFGEPYPLSGTHGIGLGDVLDAVLAAFPSEDKSVEDDSIKFSLI CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE GRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFEAVDETFTMIDTAGIRKRGKVYE CCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NTEKYAVMRALRAIDRSDVVLFVINAEEGIREQDKKVAGYAHEAGRGIIIVVNKWDTVEK CHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCHHHCCCEEEEEEECCCCCCC DNHTMKDFENLIRQEFQYLDYAPIIFVSAKTKQRLQSLPAMIVAVSENQTRRIQSSVLND CCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH VLMDAITVTPTPTVNGKRLRIYYMTQVAVKPPTFVVFVNDPDLLHFSYERFLINQLRQAF HHHHHEEECCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCEEEHHHHHHHHHHHHHHH DFSGTPIHIIARKRK CCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA