| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is pyk [H]
Identifier: 116494851
GI number: 116494851
Start: 1354628
End: 1356394
Strand: Direct
Name: pyk [H]
Synonym: LSEI_1365
Alternate gene names: 116494851
Gene position: 1354628-1356394 (Clockwise)
Preceding gene: 116494850
Following gene: 116494852
Centisome position: 46.79
GC content: 47.88
Gene sequence:
>1767_bases ATGAAAAAAACCAAGATCGTCAGCACGCTTGGACCTGCAAGTAACACCACTGATATCATCGTTAAGTTGATTGAAGCGGG TGCCAACGTTTTCCGTTTCAATTTCTCACATGGTGATCATGAAGAGCATTTGGCACGGATGAACATGGTTCACGAAGCTG AAAAGATCACGGGTAAGACCGTTGGTATCATGCTGGATACGAAGGGTGCCGAAATTCGGACAACTCTTGAAGATACCCCG AATGGTAAGATCGATTTTCACACCGGTGATAAAGTTCGCATCTCCATGGATGCAAGTCTGAAAGGCACCAAGGAAAAAGT TGCTGTTACCTATCCTGGCCTTTATGATGACACTCACGTTGGCGGCCATGTTTTGTTTGATGATGGCTTGATTGACATGA AGATCACCGAAAAGGACGAAAAGAACCGTGAACTCGTTACCGTTGTTCAAAACGACGGTGTCCTTGGTGGTAAGAAAGGT GTCAACGCTCCTGGTGTTGCCATCAACTTGCCTGGGATTACGGAAAAAGACTCCGATGACATTCGTTTCGGCTTGGACAA CGGGATCAACTTCATTGCTGCTTCCTTCGTTCGTAAGCCTCAAGACGTTTTAGACATTCGTGAACTCCTTGAAGAAAAGA ACGCACTTAATGTTCAGATCTTCCCTAAGATCGAATCACAAGAAGGCATCGACAACATTGATGACATCTTGAAGGTTTCC GATGGCTTAATGGTTGCTCGTGGCGACATGGGTGTTGAAATTCCATTTGAACATGTTCCGATCGTTCAGAAGCGCTTGAT CAAGAAGTGCAACTCTTTGGGTAAGCCGGTTATCACGGCTACACAAATGTTGGATTCCATGCAAGAAAACCCACGTCCTA CCCGTGCCGAAGTAAACGACGTTGCCAATGCCGTGTTTGATGGCACCGATGCAACGATGCTTTCTGGCGAATCTGCTAAT GGTGACTATCCGGTTGAATCCGTTGCTGCAATGGCTCGGATTGACGAATACACCGAAGCAGCGATGATGGATCAGGATGC CTTCGCATTGAAGGAATCCAGTAACAAGAACGTCACCGAAGCTGTTGGCCAAAGTGTTGCACACACGGCTCGCAACTTAG GGGTTAAGACCATTGTTGCTGCGACCGAATCCGGCTACACTGCCCGCATGATTTCCAAGTATCGTCCGAAGGCTGACATT CTTGCCATTACCTTCAGCGAAAAGACTCAACGCGGCCTGATGGTCAACTGGGGCGTTTACCCAATCATTGCTGAAAAGCC TGCTAACACCGATGCTATGTTCGACTTGGCAACCAAGAAGGCCCAAGACCTTGGCTTTGCTAAGGAAGGCGATCTGATCT TGATCACTGCCGGTGTTCCTGTTGGTGAATCTGGCACAACCAACGTAATGAAGGTTCAACTCATTGGCTCCAAGCTGGTT CAAGGCTCAGGTGTCGGCGACGAATCCACGATTGGTAAGGCAGTCATCGCAAGCAACGCTCAAGAAGCTGCTGCTAAGAT GCAAAAGGGTGACATTCTGGTTGTTAAGACGACTGACAAAGATTATTTGCCAGCAATCGAAAAAGCAGCTGCCTTGGTTG TTGAAACCGGTGGCTTGACCAGTCACGCAGCTGTTGTTGGTATTGCTATGGGTATCCCAGTTGTTGTTGGTGCTGAAAAT GCTACCAGCGTCATCTCCGATGGCCAGATCATTACTGTTGACTCCCGTCGTGGGATCATCTACAAAGGTGCTACCAACGC CCTTTAA
Upstream 100 bases:
>100_bases GAACTTTCGCTCTACACCTTAGCGGAAGAGTTAACATTTTAATCTCGTAAACAAACGACATTAACGTCTGTTTAAATAAT TTCAAGGAGCGATTTCACTT
Downstream 100 bases:
>100_bases TCTTCAAAATGACCTGTTAAAGGTTAGGAAAAACTCTCAAGGAAACTTGGGAGTTTTTTTCTTCCAAAAAAACAGTAGCG TTGCCTGTTTTGAGCAACTT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MKKTKIVSTLGPASNTTDIIVKLIEAGANVFRFNFSHGDHEEHLARMNMVHEAEKITGKTVGIMLDTKGAEIRTTLEDTP NGKIDFHTGDKVRISMDASLKGTKEKVAVTYPGLYDDTHVGGHVLFDDGLIDMKITEKDEKNRELVTVVQNDGVLGGKKG VNAPGVAINLPGITEKDSDDIRFGLDNGINFIAASFVRKPQDVLDIRELLEEKNALNVQIFPKIESQEGIDNIDDILKVS DGLMVARGDMGVEIPFEHVPIVQKRLIKKCNSLGKPVITATQMLDSMQENPRPTRAEVNDVANAVFDGTDATMLSGESAN GDYPVESVAAMARIDEYTEAAMMDQDAFALKESSNKNVTEAVGQSVAHTARNLGVKTIVAATESGYTARMISKYRPKADI LAITFSEKTQRGLMVNWGVYPIIAEKPANTDAMFDLATKKAQDLGFAKEGDLILITAGVPVGESGTTNVMKVQLIGSKLV QGSGVGDESTIGKAVIASNAQEAAAKMQKGDILVVKTTDKDYLPAIEKAAALVVETGGLTSHAAVVGIAMGIPVVVGAEN ATSVISDGQIITVDSRRGIIYKGATNAL
Sequences:
>Translated_588_residues MKKTKIVSTLGPASNTTDIIVKLIEAGANVFRFNFSHGDHEEHLARMNMVHEAEKITGKTVGIMLDTKGAEIRTTLEDTP NGKIDFHTGDKVRISMDASLKGTKEKVAVTYPGLYDDTHVGGHVLFDDGLIDMKITEKDEKNRELVTVVQNDGVLGGKKG VNAPGVAINLPGITEKDSDDIRFGLDNGINFIAASFVRKPQDVLDIRELLEEKNALNVQIFPKIESQEGIDNIDDILKVS DGLMVARGDMGVEIPFEHVPIVQKRLIKKCNSLGKPVITATQMLDSMQENPRPTRAEVNDVANAVFDGTDATMLSGESAN GDYPVESVAAMARIDEYTEAAMMDQDAFALKESSNKNVTEAVGQSVAHTARNLGVKTIVAATESGYTARMISKYRPKADI LAITFSEKTQRGLMVNWGVYPIIAEKPANTDAMFDLATKKAQDLGFAKEGDLILITAGVPVGESGTTNVMKVQLIGSKLV QGSGVGDESTIGKAVIASNAQEAAAKMQKGDILVVKTTDKDYLPAIEKAAALVVETGGLTSHAAVVGIAMGIPVVVGAEN ATSVISDGQIITVDSRRGIIYKGATNAL >Mature_588_residues MKKTKIVSTLGPASNTTDIIVKLIEAGANVFRFNFSHGDHEEHLARMNMVHEAEKITGKTVGIMLDTKGAEIRTTLEDTP NGKIDFHTGDKVRISMDASLKGTKEKVAVTYPGLYDDTHVGGHVLFDDGLIDMKITEKDEKNRELVTVVQNDGVLGGKKG VNAPGVAINLPGITEKDSDDIRFGLDNGINFIAASFVRKPQDVLDIRELLEEKNALNVQIFPKIESQEGIDNIDDILKVS DGLMVARGDMGVEIPFEHVPIVQKRLIKKCNSLGKPVITATQMLDSMQENPRPTRAEVNDVANAVFDGTDATMLSGESAN GDYPVESVAAMARIDEYTEAAMMDQDAFALKESSNKNVTEAVGQSVAHTARNLGVKTIVAATESGYTARMISKYRPKADI LAITFSEKTQRGLMVNWGVYPIIAEKPANTDAMFDLATKKAQDLGFAKEGDLILITAGVPVGESGTTNVMKVQLIGSKLV QGSGVGDESTIGKAVIASNAQEAAAKMQKGDILVVKTTDKDYLPAIEKAAALVVETGGLTSHAAVVGIAMGIPVVVGAEN ATSVISDGQIITVDSRRGIIYKGATNAL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI10835121, Length=489, Percent_Identity=40.2862985685072, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI32967597, Length=489, Percent_Identity=40.2862985685072, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI33286422, Length=489, Percent_Identity=39.6728016359918, Blast_Score=354, Evalue=1e-97, Organism=Homo sapiens, GI33286420, Length=489, Percent_Identity=39.6728016359918, Blast_Score=354, Evalue=1e-97, Organism=Homo sapiens, GI33286418, Length=489, Percent_Identity=39.6728016359918, Blast_Score=347, Evalue=2e-95, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=41.3793103448276, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=41.3793103448276, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI310128736, Length=238, Percent_Identity=37.8151260504202, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI310128734, Length=238, Percent_Identity=37.8151260504202, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI310128738, Length=217, Percent_Identity=38.2488479262673, Blast_Score=142, Evalue=6e-34, Organism=Escherichia coli, GI1787965, Length=475, Percent_Identity=47.3684210526316, Blast_Score=416, Evalue=1e-117, Organism=Escherichia coli, GI1788160, Length=479, Percent_Identity=38.8308977035491, Blast_Score=282, Evalue=4e-77, Organism=Escherichia coli, GI1787994, Length=144, Percent_Identity=30.5555555555556, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17544584, Length=485, Percent_Identity=38.7628865979381, Blast_Score=341, Evalue=5e-94, Organism=Caenorhabditis elegans, GI71984413, Length=486, Percent_Identity=39.5061728395062, Blast_Score=320, Evalue=1e-87, Organism=Caenorhabditis elegans, GI17506829, Length=486, Percent_Identity=39.5061728395062, Blast_Score=320, Evalue=2e-87, Organism=Caenorhabditis elegans, GI71984406, Length=486, Percent_Identity=39.5061728395062, Blast_Score=320, Evalue=2e-87, Organism=Caenorhabditis elegans, GI17506831, Length=486, Percent_Identity=39.5061728395062, Blast_Score=319, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6319279, Length=492, Percent_Identity=39.0243902439024, Blast_Score=328, Evalue=2e-90, Organism=Saccharomyces cerevisiae, GI6324923, Length=497, Percent_Identity=39.0342052313883, Blast_Score=312, Evalue=1e-85, Organism=Drosophila melanogaster, GI24648964, Length=484, Percent_Identity=40.0826446280992, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI28571814, Length=486, Percent_Identity=40.3292181069959, Blast_Score=340, Evalue=2e-93, Organism=Drosophila melanogaster, GI24648966, Length=414, Percent_Identity=42.2705314009662, Blast_Score=310, Evalue=2e-84, Organism=Drosophila melanogaster, GI24581235, Length=484, Percent_Identity=35.1239669421488, Blast_Score=284, Evalue=2e-76, Organism=Drosophila melanogaster, GI24646914, Length=268, Percent_Identity=41.044776119403, Blast_Score=201, Evalue=2e-51,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 62807; Mature: 62807
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTKIVSTLGPASNTTDIIVKLIEAGANVFRFNFSHGDHEEHLARMNMVHEAEKITGKT CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCE VGIMLDTKGAEIRTTLEDTPNGKIDFHTGDKVRISMDASLKGTKEKVAVTYPGLYDDTHV EEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCCCCC GGHVLFDDGLIDMKITEKDEKNRELVTVVQNDGVLGGKKGVNAPGVAINLPGITEKDSDD CCEEEEECCEEEEEECCCCCCCCEEEEEEECCCEECCCCCCCCCCEEEECCCCCCCCCCC IRFGLDNGINFIAASFVRKPQDVLDIRELLEEKNALNVQIFPKIESQEGIDNIDDILKVS EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHC DGLMVARGDMGVEIPFEHVPIVQKRLIKKCNSLGKPVITATQMLDSMQENPRPTRAEVND CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH VANAVFDGTDATMLSGESANGDYPVESVAAMARIDEYTEAAMMDQDAFALKESSNKNVTE HHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHH AVGQSVAHTARNLGVKTIVAATESGYTARMISKYRPKADILAITFSEKTQRGLMVNWGVY HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCEE PIIAEKPANTDAMFDLATKKAQDLGFAKEGDLILITAGVPVGESGTTNVMKVQLIGSKLV EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHH QGSGVGDESTIGKAVIASNAQEAAAKMQKGDILVVKTTDKDYLPAIEKAAALVVETGGLT CCCCCCCCHHHCHHHHHCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHCEEEEEECCCCC SHAAVVGIAMGIPVVVGAENATSVISDGQIITVDSRRGIIYKGATNAL HHHHHHHHHHCCCEEEECCCCHHHCCCCEEEEEECCCCEEEECCCCCC >Mature Secondary Structure MKKTKIVSTLGPASNTTDIIVKLIEAGANVFRFNFSHGDHEEHLARMNMVHEAEKITGKT CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCE VGIMLDTKGAEIRTTLEDTPNGKIDFHTGDKVRISMDASLKGTKEKVAVTYPGLYDDTHV EEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCCCCC GGHVLFDDGLIDMKITEKDEKNRELVTVVQNDGVLGGKKGVNAPGVAINLPGITEKDSDD CCEEEEECCEEEEEECCCCCCCCEEEEEEECCCEECCCCCCCCCCEEEECCCCCCCCCCC IRFGLDNGINFIAASFVRKPQDVLDIRELLEEKNALNVQIFPKIESQEGIDNIDDILKVS EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHC DGLMVARGDMGVEIPFEHVPIVQKRLIKKCNSLGKPVITATQMLDSMQENPRPTRAEVND CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH VANAVFDGTDATMLSGESANGDYPVESVAAMARIDEYTEAAMMDQDAFALKESSNKNVTE HHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHH AVGQSVAHTARNLGVKTIVAATESGYTARMISKYRPKADILAITFSEKTQRGLMVNWGVY HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCEE PIIAEKPANTDAMFDLATKKAQDLGFAKEGDLILITAGVPVGESGTTNVMKVQLIGSKLV EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHH QGSGVGDESTIGKAVIASNAQEAAAKMQKGDILVVKTTDKDYLPAIEKAAALVVETGGLT CCCCCCCCHHHCHHHHHCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHCEEEEEECCCCC SHAAVVGIAMGIPVVVGAENATSVISDGQIITVDSRRGIIYKGATNAL HHHHHHHHHHCCCEEEECCCCHHHCCCCEEEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8755908; 8366023; 8274531 [H]