Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is artP [H]

Identifier: 116494753

GI number: 116494753

Start: 1240773

End: 1241585

Strand: Direct

Name: artP [H]

Synonym: LSEI_1262

Alternate gene names: 116494753

Gene position: 1240773-1241585 (Clockwise)

Preceding gene: 116494752

Following gene: 116494754

Centisome position: 42.86

GC content: 44.28

Gene sequence:

>813_bases
ATGAAACGCCGAATCGTACTGGCACTCATGTTACTCGTCACATTGCTAGGCACCGTCATTAGCGGATGTGCGCGCGAAAC
CGTCGGCAATTCCTGGCCACGGATCGAACGAACCAAAAAAGTCGTCATCGGTTTGGATGACACCTTTGTTCCAATGGGAT
TCCGTCAAAAGAACGGTCAACTGGCTGGCTATGACATTGATCTGGCAAAAGCGGTATTCAAACGCTATGGGATTAATGTC
GATTTTCAAACGATTGATTGGTCAATGAAGGAAACTGAACTGAAAAATCAAACAATTGATTTGATCTGGAATGGTTATTC
GGTGACACCGGAACGAAAAGAGAAGGTGGCTTTCTCTGATAATTATTTGATTAATCACCAAATTTTAGTCACCAAGACCA
AAAGTAATATCAAAACGATCAAAGATATGGCTGGGAAAACCTTGGGTGTCCAAACTGGGTCAAGTGGCGCCTTTGATCTC
GATGCCCAGCCAAAATTGCTGAAGAATTTCATTGCAAACAAAACACCAATTCTGTATGACACCTTTAACGATGCTTTCAT
TGATCTCGATGCAGGACGCATTCAAGGAATTTTAATGGATGAAGTCTACGCTCGCTATTACATTGCCCACAAACCGGACC
CGTCCAGCTATCGCATTGCCAGCGACGACTTTCCACCTGAAAACTTTGCGGTTGGCATGCGCAAGTCAGACAATGTCTTA
CGCAGCAAGATTAATGCCGGTTTGAAAGCACTTAAAGCTGACGGCACCGTAGCAAAGTTGCAGAAAAAATGGTTTGGCAA
AGTCGGGGAGTAA

Upstream 100 bases:

>100_bases
AAGCTTCTGGCATGACGCAGGTTGTCGTCACGCATGACATGGACTTTGCCGAAAGCGTGGCTGACACGACTTATCACGTT
GGCAAAGGCGGTGACGGTCA

Downstream 100 bases:

>100_bases
TCAGCGTATTTGCGAAGAAAAAATGAGGTTGTGCCGCTGGCAATTGTCAGGGCATGACCTTTTTTCGTCAAGAGGCATCT
AAAAAGGGAACTTCGAGACC

Product: amino acid ABC transporter periplasmic protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQLAGYDIDLAKAVFKRYGINV
DFQTIDWSMKETELKNQTIDLIWNGYSVTPERKEKVAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDL
DAQPKLLKNFIANKTPILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRKSDNVL
RSKINAGLKALKADGTVAKLQKKWFGKVGE

Sequences:

>Translated_270_residues
MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQLAGYDIDLAKAVFKRYGINV
DFQTIDWSMKETELKNQTIDLIWNGYSVTPERKEKVAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDL
DAQPKLLKNFIANKTPILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRKSDNVL
RSKINAGLKALKADGTVAKLQKKWFGKVGE
>Mature_270_residues
MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQLAGYDIDLAKAVFKRYGINV
DFQTIDWSMKETELKNQTIDLIWNGYSVTPERKEKVAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDL
DAQPKLLKNFIANKTPILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRKSDNVL
RSKINAGLKALKADGTVAKLQKKWFGKVGE

Specific function: Part of a binding-protein-dependent transport system for arginine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787085, Length=230, Percent_Identity=29.1304347826087, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787031, Length=229, Percent_Identity=28.82096069869, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1788228, Length=268, Percent_Identity=26.1194029850746, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1788648, Length=235, Percent_Identity=30.2127659574468, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1788649, Length=276, Percent_Identity=28.2608695652174, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787088, Length=270, Percent_Identity=24.8148148148148, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1786876, Length=244, Percent_Identity=22.1311475409836, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30278; Mature: 30278

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEECCCEECCCCE
LAGYDIDLAKAVFKRYGINVDFQTIDWSMKETELKNQTIDLIWNGYSVTPERKEKVAFSD
EECCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCEEEEEECCEECCCCHHHEEEECC
NYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDLDAQPKLLKNFIANKTPILYD
CEEEEEEEEEEECCCHHHHHHHHCCCEEEEECCCCCCEECCCCHHHHHHHHCCCCCEEEE
TFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRKSDNVL
CCCCEEEEECCHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCEEECCCCCHHHH
RSKINAGLKALKADGTVAKLQKKWFGKVGE
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEECCCEECCCCE
LAGYDIDLAKAVFKRYGINVDFQTIDWSMKETELKNQTIDLIWNGYSVTPERKEKVAFSD
EECCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCEEEEEECCEECCCCHHHEEEECC
NYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDLDAQPKLLKNFIANKTPILYD
CEEEEEEEEEEECCCHHHHHHHHCCCEEEEECCCCCCEECCCCHHHHHHHHCCCCCEEEE
TFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRKSDNVL
CCCCEEEEECCHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCEEECCCCCHHHH
RSKINAGLKALKADGTVAKLQKKWFGKVGE
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]