Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494728

Identifier: 116494728

GI number: 116494728

Start: 1212555

End: 1212785

Strand: Direct

Name: 116494728

Synonym: LSEI_1234

Alternate gene names: NA

Gene position: 1212555-1212785 (Clockwise)

Preceding gene: 116494727

Following gene: 116494729

Centisome position: 41.88

GC content: 38.1

Gene sequence:

>231_bases
ATGACGGTCAGTTGGTACTTAGAAGATTTTAACGATGAATCCAATGAACTTAATAACGATCCGGATATTGATTTTTCGAC
CTTTAATCAACGTACTCATAATATTCAACTGAAAGTAAAAGGCGGTAAAGGATTACTGCGGTTCGTTAATCAGCAAGTGT
GGGGAACGGAGGGTGTGAGTGAAAGCATGATTTTCAACGGTCACAAAATTGCTGATGCCTTTAATAAGTAG

Upstream 100 bases:

>100_bases
AAAGTAAAACCCAAGACATGACTGCGATTTAAAAGTCCTTGATCTGTAGGTGCTACTTTTTTTACGAGAGCTCTATTCGG
ATTCAGAAGGAGAAAATTAC

Downstream 100 bases:

>100_bases
TGGCTGCTTAAAAATTCTATAATTCAGGCAGTTAAGCTAATATATGCATTATTGCGGTATAATAAATCCATTGGAATTAG
CTGTTTTCCTGCATTTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MTVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVSESMIFNGHKIADAFNK

Sequences:

>Translated_76_residues
MTVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVSESMIFNGHKIADAFNK
>Mature_75_residues
TVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVSESMIFNGHKIADAFNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8738; Mature: 8607

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVS
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCC
ESMIFNGHKIADAFNK
CCEEECCCCCCCCCCC
>Mature Secondary Structure 
TVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVS
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCC
ESMIFNGHKIADAFNK
CCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA