| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494728
Identifier: 116494728
GI number: 116494728
Start: 1212555
End: 1212785
Strand: Direct
Name: 116494728
Synonym: LSEI_1234
Alternate gene names: NA
Gene position: 1212555-1212785 (Clockwise)
Preceding gene: 116494727
Following gene: 116494729
Centisome position: 41.88
GC content: 38.1
Gene sequence:
>231_bases ATGACGGTCAGTTGGTACTTAGAAGATTTTAACGATGAATCCAATGAACTTAATAACGATCCGGATATTGATTTTTCGAC CTTTAATCAACGTACTCATAATATTCAACTGAAAGTAAAAGGCGGTAAAGGATTACTGCGGTTCGTTAATCAGCAAGTGT GGGGAACGGAGGGTGTGAGTGAAAGCATGATTTTCAACGGTCACAAAATTGCTGATGCCTTTAATAAGTAG
Upstream 100 bases:
>100_bases AAAGTAAAACCCAAGACATGACTGCGATTTAAAAGTCCTTGATCTGTAGGTGCTACTTTTTTTACGAGAGCTCTATTCGG ATTCAGAAGGAGAAAATTAC
Downstream 100 bases:
>100_bases TGGCTGCTTAAAAATTCTATAATTCAGGCAGTTAAGCTAATATATGCATTATTGCGGTATAATAAATCCATTGGAATTAG CTGTTTTCCTGCATTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVSESMIFNGHKIADAFNK
Sequences:
>Translated_76_residues MTVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVSESMIFNGHKIADAFNK >Mature_75_residues TVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVSESMIFNGHKIADAFNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8738; Mature: 8607
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVS CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCC ESMIFNGHKIADAFNK CCEEECCCCCCCCCCC >Mature Secondary Structure TVSWYLEDFNDESNELNNDPDIDFSTFNQRTHNIQLKVKGGKGLLRFVNQQVWGTEGVS EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCC ESMIFNGHKIADAFNK CCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA