Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494727

Identifier: 116494727

GI number: 116494727

Start: 1211649

End: 1212461

Strand: Direct

Name: 116494727

Synonym: LSEI_1233

Alternate gene names: NA

Gene position: 1211649-1212461 (Clockwise)

Preceding gene: 116494726

Following gene: 116494728

Centisome position: 41.85

GC content: 51.54

Gene sequence:

>813_bases
GTGAGCTCATATATTGACGCCTTTGAAAAGGCCACCGGGCAGCCGGCACCGCCGGAAGCTGGCAAACTCGATCAACTTTT
CAATCAAATCAGACAAGGGAAAACGTTGCCGCCACGCGGGCAGCAAGCCGTTGCGATGGGATTAACTGCGCACACGCTTA
ATGACGCACGGGAAGACCCAGCACTTTTTGCCTATTATCGCTGGGTCATGACCCACTGCTTTAAATCGGGTCAGGTCAAC
GAACTGACTGCCCGACTCATCGGTATGGCCTTTACCTCGGCTAATATTTTTGACACCGACTTGCCCCAACCGCTGACCCT
CAATCCCTGGCAGCTCACACCTATGCTCGACTTTCCACTGAAAAACAAACAAGCCGTTGTCATCGAAAACAACGGCGTCT
TTGCTTTACTACACCAAGAACATCCCGACTGGCCGTTAATCTTACAGTCTGGCAACGACTTTAACGAGGTTTATGTCCAA
CTCATCCAACGACTTGAGGCGCGGGGGATGCGCTACGTCTACCTCGGTGATCTCGACAGCGCCGGCATTCAAATGGCCGA
TCAGTTTGCAAGGCTGTTGAAGCAAACATCAGCCGAAGAAGTGGCGGCGTTGCAACAACCAACCGATGTTCGACTTTGGT
TAGCTGATCTTGGCAAAATAGACGTTCGCCGCACCAAGCAACGCAAGGTCGTCTCGCCGGTCTATCAAGCAGAGATGACG
ACGATTGCACTTTTTGGGAAGTTTATTGAGCAGGAACAGTTGATGGGGGTTTATGAGGTGCGGGTTGCTGAGTGGCTTGA
GAGAAAAAAGTAA

Upstream 100 bases:

>100_bases
TTCCCCGCAACAAGGTGACGGGAAATTCCACCTTAATCGCGTCCAACAAAACTTTATTTGGAAAAAGGACGACTAATCAG
AGAATCGTGGGGTAGTAGAA

Downstream 100 bases:

>100_bases
AACCCAAGACATGACTGCGATTTAAAAGTCCTTGATCTGTAGGTGCTACTTTTTTTACGAGAGCTCTATTCGGATTCAGA
AGGAGAAAATTACATGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSSYIDAFEKATGQPAPPEAGKLDQLFNQIRQGKTLPPRGQQAVAMGLTAHTLNDAREDPALFAYYRWVMTHCFKSGQVN
ELTARLIGMAFTSANIFDTDLPQPLTLNPWQLTPMLDFPLKNKQAVVIENNGVFALLHQEHPDWPLILQSGNDFNEVYVQ
LIQRLEARGMRYVYLGDLDSAGIQMADQFARLLKQTSAEEVAALQQPTDVRLWLADLGKIDVRRTKQRKVVSPVYQAEMT
TIALFGKFIEQEQLMGVYEVRVAEWLERKK

Sequences:

>Translated_270_residues
MSSYIDAFEKATGQPAPPEAGKLDQLFNQIRQGKTLPPRGQQAVAMGLTAHTLNDAREDPALFAYYRWVMTHCFKSGQVN
ELTARLIGMAFTSANIFDTDLPQPLTLNPWQLTPMLDFPLKNKQAVVIENNGVFALLHQEHPDWPLILQSGNDFNEVYVQ
LIQRLEARGMRYVYLGDLDSAGIQMADQFARLLKQTSAEEVAALQQPTDVRLWLADLGKIDVRRTKQRKVVSPVYQAEMT
TIALFGKFIEQEQLMGVYEVRVAEWLERKK
>Mature_269_residues
SSYIDAFEKATGQPAPPEAGKLDQLFNQIRQGKTLPPRGQQAVAMGLTAHTLNDAREDPALFAYYRWVMTHCFKSGQVNE
LTARLIGMAFTSANIFDTDLPQPLTLNPWQLTPMLDFPLKNKQAVVIENNGVFALLHQEHPDWPLILQSGNDFNEVYVQL
IQRLEARGMRYVYLGDLDSAGIQMADQFARLLKQTSAEEVAALQQPTDVRLWLADLGKIDVRRTKQRKVVSPVYQAEMTT
IALFGKFIEQEQLMGVYEVRVAEWLERKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30654; Mature: 30522

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYIDAFEKATGQPAPPEAGKLDQLFNQIRQGKTLPPRGQQAVAMGLTAHTLNDAREDP
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
ALFAYYRWVMTHCFKSGQVNELTARLIGMAFTSANIFDTDLPQPLTLNPWQLTPMLDFPL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECEEECCCC
KNKQAVVIENNGVFALLHQEHPDWPLILQSGNDFNEVYVQLIQRLEARGMRYVYLGDLDS
CCCCEEEEECCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
AGIQMADQFARLLKQTSAEEVAALQQPTDVRLWLADLGKIDVRRTKQRKVVSPVYQAEMT
HHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHH
TIALFGKFIEQEQLMGVYEVRVAEWLERKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSYIDAFEKATGQPAPPEAGKLDQLFNQIRQGKTLPPRGQQAVAMGLTAHTLNDAREDP
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
ALFAYYRWVMTHCFKSGQVNELTARLIGMAFTSANIFDTDLPQPLTLNPWQLTPMLDFPL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECEEECCCC
KNKQAVVIENNGVFALLHQEHPDWPLILQSGNDFNEVYVQLIQRLEARGMRYVYLGDLDS
CCCCEEEEECCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
AGIQMADQFARLLKQTSAEEVAALQQPTDVRLWLADLGKIDVRRTKQRKVVSPVYQAEMT
HHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHH
TIALFGKFIEQEQLMGVYEVRVAEWLERKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA