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The map label for this gene is atpE

Identifier: 116494657

GI number: 116494657

Start: 1146091

End: 1146303

Strand: Direct

Name: atpE

Synonym: LSEI_1161

Alternate gene names: 116494657

Gene position: 1146091-1146303 (Clockwise)

Preceding gene: 116494656

Following gene: 116494658

Centisome position: 39.59

GC content: 51.64

Gene sequence:

>213_bases
ATGCAATTCATCGCTGCATCAATCGCCGCCGGCATCGCTGCCTTCGGTGCTTCAATCGGTAACGGGATGGTTATCAGCAA
AACCCTCGAAGGTATGGCTCGTCAGCCGGAAATGGCTGGGACACTTCGTGGGACTATGTTCATCGGTGTTGGCTTGATTG
AAGCCGTTCCGATCTTGTCTGTCGTTGTTGCCTTCATGTTGATGAGTCGTTAA

Upstream 100 bases:

>100_bases
TTCATTGGTAGTATTCAAGCGTACGTTTTTGTCACGCTTGGGATGGTTTACACATCACACAAAATTGTGTCCGAGTAACT
AAATTAGGAGGAAATTTCTT

Downstream 100 bases:

>100_bases
TCTGGTTCATCAATAAAGAAGGGAGTGGCAAAAAATGACTTTAGGTGACACACTCTTCACACTAGTCACATTTCTGGTTC
TGATGCTAGCCGTCGGGAAA

Product: F0F1-type ATP synthase, subunit c

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MQFIAASIAAGIAAFGASIGNGMVISKTLEGMARQPEMAGTLRGTMFIGVGLIEAVPILSVVVAFMLMSR

Sequences:

>Translated_70_residues
MQFIAASIAAGIAAFGASIGNGMVISKTLEGMARQPEMAGTLRGTMFIGVGLIEAVPILSVVVAFMLMSR
>Mature_70_residues
MQFIAASIAAGIAAFGASIGNGMVISKTLEGMARQPEMAGTLRGTMFIGVGLIEAVPILSVVVAFMLMSR

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_LACC3 (Q03A23)

Other databases:

- EMBL:   CP000423
- RefSeq:   YP_806391.1
- ProteinModelPortal:   Q03A23
- SMR:   Q03A23
- STRING:   Q03A23
- GeneID:   4421618
- GenomeReviews:   CP000423_GR
- KEGG:   lca:LSEI_1161
- eggNOG:   COG0636
- HOGENOM:   HBG753983
- OMA:   VEGVSRN
- ProtClustDB:   CLSK2317915
- BioCyc:   LCAS321967:LSEI_1161-MONOMER
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124
- TIGRFAMs:   TIGR01260

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.14

Molecular weight: Translated: 7174; Mature: 7174

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14ed471c)-; HASH(0x149e74d8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFIAASIAAGIAAFGASIGNGMVISKTLEGMARQPEMAGTLRGTMFIGVGLIEAVPILS
CCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VVVAFMLMSR
HHHHHHHHCH
>Mature Secondary Structure
MQFIAASIAAGIAAFGASIGNGMVISKTLEGMARQPEMAGTLRGTMFIGVGLIEAVPILS
CCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VVVAFMLMSR
HHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA