| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is mviM [H]
Identifier: 116494634
GI number: 116494634
Start: 1120510
End: 1121427
Strand: Direct
Name: mviM [H]
Synonym: LSEI_1135
Alternate gene names: 116494634
Gene position: 1120510-1121427 (Clockwise)
Preceding gene: 116494625
Following gene: 116494635
Centisome position: 38.7
GC content: 49.02
Gene sequence:
>918_bases ATGTTAACGATTGGTGTCATGGGACTTGGTACGATTGCGCAGAAAGCATATCTGCCAGTTTACACACAAATGCAGAATCA AGTGCACTGGGTACTGAGCACCCGCAACGACGATAAATTGCAACAATTGGCAACACAAGACGGACTCGCGATTGCGGGCA CGACTTTAGAGGATTTGGATGCGCAACCGCTCGATGCCGTCATGATCCACACGCCAACGGAAACCCATTATCAGTATGTG AAACATTTTCTGGAAAAAGGCGTCAACGTTTTTGTTGATAAACCACTTGCCACAGATATGGGCCAAATCAATGAATTATA TGATTTAGCCGATACCCAGCACGTGCTGCTAACGGTTGGATTCAATCGACGATTTGCGCCTATGATTCAGGACTTGGCTG AAGTCGATGATAAAACCGGCGTTCGCGTTGACAAAAATCGGATTGACGCCCCTGACGATCCAGAACATGCACTCTGGGAT CTCTTTATTCATCCGGTAGATACGGCCTTAATGTTGGCAGGCTATCCAGAAAAACCAAATACCCGATATTCATTGCATAC CGGCGATGATGGTAAACTGCAGCAAGCTAGTGTGATTTTCACCGCACCGGGCATCCGCGGTGAAGCCGGGATTGACTTAC AAGCAGGTACCAATCTTGAAGAAGCTCAGGTTGCGGCTCCAAGTGGCGTTCAGCGTGTGCAGAATCTTGATCAACTCGTC GTTTACGGACGTGGCGGGGCAACGCAGACATTCGCGCCTGATTGGCAGCCGATGTTAACAACGCGCGGTTTTCAGCCAAT GGTTCAGGCCTTTGTTCAGGCTGTGGCGGATCCAGAAGGGAAAAACCCGGTATCACCAGCTACTAGTCAATTGGCGCACG CAGTTGTTGCGGATTTGGTTAATCAGATCAAGGCTTAA
Upstream 100 bases:
>100_bases ACTAGGCAGGCGGATCATTACGAATGCTTATCTTTACCCTGACAGGGGCCTGTGCTAGTGTGAAAGTAAATTATTTTGTC ATGAAAGAACAGGTGAAACG
Downstream 100 bases:
>100_bases GTTGTCGTGGATTTTGGGATATAAGGCATCTAATCATTCGGATGCCATCAAGAAAATGCTCGCTAGTGAATTTTTGGCGT GGTGAGTGCTGTCTTTTTGG
Product: dehydrogenase related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MLTIGVMGLGTIAQKAYLPVYTQMQNQVHWVLSTRNDDKLQQLATQDGLAIAGTTLEDLDAQPLDAVMIHTPTETHYQYV KHFLEKGVNVFVDKPLATDMGQINELYDLADTQHVLLTVGFNRRFAPMIQDLAEVDDKTGVRVDKNRIDAPDDPEHALWD LFIHPVDTALMLAGYPEKPNTRYSLHTGDDGKLQQASVIFTAPGIRGEAGIDLQAGTNLEEAQVAAPSGVQRVQNLDQLV VYGRGGATQTFAPDWQPMLTTRGFQPMVQAFVQAVADPEGKNPVSPATSQLAHAVVADLVNQIKA
Sequences:
>Translated_305_residues MLTIGVMGLGTIAQKAYLPVYTQMQNQVHWVLSTRNDDKLQQLATQDGLAIAGTTLEDLDAQPLDAVMIHTPTETHYQYV KHFLEKGVNVFVDKPLATDMGQINELYDLADTQHVLLTVGFNRRFAPMIQDLAEVDDKTGVRVDKNRIDAPDDPEHALWD LFIHPVDTALMLAGYPEKPNTRYSLHTGDDGKLQQASVIFTAPGIRGEAGIDLQAGTNLEEAQVAAPSGVQRVQNLDQLV VYGRGGATQTFAPDWQPMLTTRGFQPMVQAFVQAVADPEGKNPVSPATSQLAHAVVADLVNQIKA >Mature_305_residues MLTIGVMGLGTIAQKAYLPVYTQMQNQVHWVLSTRNDDKLQQLATQDGLAIAGTTLEDLDAQPLDAVMIHTPTETHYQYV KHFLEKGVNVFVDKPLATDMGQINELYDLADTQHVLLTVGFNRRFAPMIQDLAEVDDKTGVRVDKNRIDAPDDPEHALWD LFIHPVDTALMLAGYPEKPNTRYSLHTGDDGKLQQASVIFTAPGIRGEAGIDLQAGTNLEEAQVAAPSGVQRVQNLDQLV VYGRGGATQTFAPDWQPMLTTRGFQPMVQAFVQAVADPEGKNPVSPATSQLAHAVVADLVNQIKA
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli mviM [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=279, Percent_Identity=32.258064516129, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: NA
Molecular weight: Translated: 33348; Mature: 33348
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIGVMGLGTIAQKAYLPVYTQMQNQVHWVLSTRNDDKLQQLATQDGLAIAGTTLEDLD CEEEEEECHHHHHHHHHCHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCHHHCC AQPLDAVMIHTPTETHYQYVKHFLEKGVNVFVDKPLATDMGQINELYDLADTQHVLLTVG CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEC FNRRFAPMIQDLAEVDDKTGVRVDKNRIDAPDDPEHALWDLFIHPVDTALMLAGYPEKPN CCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCHHHHHEEECCCCCCC TRYSLHTGDDGKLQQASVIFTAPGIRGEAGIDLQAGTNLEEAQVAAPSGVQRVQNLDQLV CEEEEECCCCCCEEEEEEEEECCCCCCCCCEEECCCCCHHHHHHCCCHHHHHHHCCCCEE VYGRGGATQTFAPDWQPMLTTRGFQPMVQAFVQAVADPEGKNPVSPATSQLAHAVVADLV EECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH NQIKA HHHCC >Mature Secondary Structure MLTIGVMGLGTIAQKAYLPVYTQMQNQVHWVLSTRNDDKLQQLATQDGLAIAGTTLEDLD CEEEEEECHHHHHHHHHCHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCHHHCC AQPLDAVMIHTPTETHYQYVKHFLEKGVNVFVDKPLATDMGQINELYDLADTQHVLLTVG CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEC FNRRFAPMIQDLAEVDDKTGVRVDKNRIDAPDDPEHALWDLFIHPVDTALMLAGYPEKPN CCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCHHHHHEEECCCCCCC TRYSLHTGDDGKLQQASVIFTAPGIRGEAGIDLQAGTNLEEAQVAAPSGVQRVQNLDQLV CEEEEECCCCCCEEEEEEEEECCCCCCCCCEEECCCCCHHHHHHCCCHHHHHHHCCCCEE VYGRGGATQTFAPDWQPMLTTRGFQPMVQAFVQAVADPEGKNPVSPATSQLAHAVVADLV EECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH NQIKA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]