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The map label for this gene is yqjA [H]

Identifier: 116494611

GI number: 116494611

Start: 1098182

End: 1099147

Strand: Direct

Name: yqjA [H]

Synonym: LSEI_1112

Alternate gene names: 116494611

Gene position: 1098182-1099147 (Clockwise)

Preceding gene: 116494608

Following gene: 116494612

Centisome position: 37.93

GC content: 46.69

Gene sequence:

>966_bases
ATGCACATAGGTATGCGAACGGTTAAAACAGCAGTGGGGACGGCAGCGGCAATGCTGATTGCTTACGAGTTGCACCTTGA
ATATTGGACGGCCGCTGGGATTATTACGATTTTATCAGTCCAGAATACGACCAAGGCATCATTTCGGCTAGTCGCGTATC
GCTTATTGGCGACCGTGTTAGGTTTTGTGATTGCGATCGGTGCATTTTTGGTGCTGGGGTACAATGCGCTGGCTTTCGGG
CTTTTCTTACTCATTTTCATTCCTTTGACCAACGTGTTTGCGGTGCAGAGCGGTATCGTCATGACCGCGGTGCTAGTCAC
TCATTTTATGATGGCGAAAAGCTGCAGTTGGTTCTGGATTAAAAATGAACTATTATTGCTCGTAGTGGGCGCTGGTGTGG
CATTGATTGCCAATTTGTTCATGCCAAGTCTGGAAGCCAAAATCACTGAGTTTCAGGCACAAGTCGAAGCCGAGATGCGC
GAGATTCTCGATCATATGAGCCAGCAATTGGGTCCGGATCACATTAAAAGTGCGGACAATTGGGCGAATTTGTCAGATTT
GAAAATGACCTTAGATGCCGCTGTTGCTTGGGCTAATCGCCATAGTGACAATCAATTGCTGGCCGATAACGATTATTTTC
AAGCCTATTTTGAAATGCGCGACAATCAATATGAGTTGCTCCGGCAAATGCAAGACAGCCTTGACCGTATCGAAACTCCT
GTGGAACAAGCAGCCGTTATCAGCGATGCCTTGGCGATGACAGCCAGTGTTCTGACTGAAGACAATCCCGCCACACAATT
GGTCACCATGGTCAAAAAAATTCAACGCGATTTTGCTAAATCAGCGCTGCCAACAGACCGCGCAAGCTTCGAAAGCCGCG
CGCGTTTGTTCTATTTCCTAGAAGACTTTTCCCGCTTGTTGCAGTTAAAGCGGAATTTTAACAATATTATTTCATCGCAG
AATTGA

Upstream 100 bases:

>100_bases
TAAAGCCCGATTAAATACTAGCGGGGCGTGACGAGTACATGTGTTGACTATTCATTAAATGGAATGTTCTATGCTAAACT
GACTCTGGAGGGTGATGGCC

Downstream 100 bases:

>100_bases
TTTGCGGTTTCCTACATGTCCTAAGTCATTTAAGTTGGAAAATAAAAAGGGGCGTTTAATCTGATGGATGTCAAAGTCAT
AAAACTCGGTACCTCATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MHIGMRTVKTAVGTAAAMLIAYELHLEYWTAAGIITILSVQNTTKASFRLVAYRLLATVLGFVIAIGAFLVLGYNALAFG
LFLLIFIPLTNVFAVQSGIVMTAVLVTHFMMAKSCSWFWIKNELLLLVVGAGVALIANLFMPSLEAKITEFQAQVEAEMR
EILDHMSQQLGPDHIKSADNWANLSDLKMTLDAAVAWANRHSDNQLLADNDYFQAYFEMRDNQYELLRQMQDSLDRIETP
VEQAAVISDALAMTASVLTEDNPATQLVTMVKKIQRDFAKSALPTDRASFESRARLFYFLEDFSRLLQLKRNFNNIISSQ
N

Sequences:

>Translated_321_residues
MHIGMRTVKTAVGTAAAMLIAYELHLEYWTAAGIITILSVQNTTKASFRLVAYRLLATVLGFVIAIGAFLVLGYNALAFG
LFLLIFIPLTNVFAVQSGIVMTAVLVTHFMMAKSCSWFWIKNELLLLVVGAGVALIANLFMPSLEAKITEFQAQVEAEMR
EILDHMSQQLGPDHIKSADNWANLSDLKMTLDAAVAWANRHSDNQLLADNDYFQAYFEMRDNQYELLRQMQDSLDRIETP
VEQAAVISDALAMTASVLTEDNPATQLVTMVKKIQRDFAKSALPTDRASFESRARLFYFLEDFSRLLQLKRNFNNIISSQ
N
>Mature_321_residues
MHIGMRTVKTAVGTAAAMLIAYELHLEYWTAAGIITILSVQNTTKASFRLVAYRLLATVLGFVIAIGAFLVLGYNALAFG
LFLLIFIPLTNVFAVQSGIVMTAVLVTHFMMAKSCSWFWIKNELLLLVVGAGVALIANLFMPSLEAKITEFQAQVEAEMR
EILDHMSQQLGPDHIKSADNWANLSDLKMTLDAAVAWANRHSDNQLLADNDYFQAYFEMRDNQYELLRQMQDSLDRIETP
VEQAAVISDALAMTASVLTEDNPATQLVTMVKKIQRDFAKSALPTDRASFESRARLFYFLEDFSRLLQLKRNFNNIISSQ
N

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343
- InterPro:   IPR021062 [H]

Pfam domain/function: PF06081 DUF939; PF11728 DUF939_C [H]

EC number: NA

Molecular weight: Translated: 35961; Mature: 35961

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIGMRTVKTAVGTAAAMLIAYELHLEYWTAAGIITILSVQNTTKASFRLVAYRLLATVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHH
GFVIAIGAFLVLGYNALAFGLFLLIFIPLTNVFAVQSGIVMTAVLVTHFMMAKSCSWFWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KNELLLLVVGAGVALIANLFMPSLEAKITEFQAQVEAEMREILDHMSQQLGPDHIKSADN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
WANLSDLKMTLDAAVAWANRHSDNQLLADNDYFQAYFEMRDNQYELLRQMQDSLDRIETP
CCCHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
VEQAAVISDALAMTASVLTEDNPATQLVTMVKKIQRDFAKSALPTDRASFESRARLFYFL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
EDFSRLLQLKRNFNNIISSQN
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHIGMRTVKTAVGTAAAMLIAYELHLEYWTAAGIITILSVQNTTKASFRLVAYRLLATVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHH
GFVIAIGAFLVLGYNALAFGLFLLIFIPLTNVFAVQSGIVMTAVLVTHFMMAKSCSWFWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KNELLLLVVGAGVALIANLFMPSLEAKITEFQAQVEAEMREILDHMSQQLGPDHIKSADN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
WANLSDLKMTLDAAVAWANRHSDNQLLADNDYFQAYFEMRDNQYELLRQMQDSLDRIETP
CCCHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
VEQAAVISDALAMTASVLTEDNPATQLVTMVKKIQRDFAKSALPTDRASFESRARLFYFL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
EDFSRLLQLKRNFNNIISSQN
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]