| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is yfmL [H]
Identifier: 116494578
GI number: 116494578
Start: 1061906
End: 1063192
Strand: Direct
Name: yfmL [H]
Synonym: LSEI_1076
Alternate gene names: 116494578
Gene position: 1061906-1063192 (Clockwise)
Preceding gene: 116494577
Following gene: 116494579
Centisome position: 36.68
GC content: 51.98
Gene sequence:
>1287_bases GTGACAATTGCAACCCCGTTCCAAAAACGCTGGCAAGCAGCCGGCTATACTGAACAGACGCCGATTCAAACCGCCGTGTA TCAACCACTGAAAGCCGATGAAGATGTTGTTGGGCTTGCTCCAACAGGCTCAGGGAAAACATTAGCTTTTGGCTTACCAC TACTTGAAAAAATGGTGCCAGGCGATGGCTTACAACTCTTAATTTTGGCACCATCACAAGAGTTGGCGATTCAAACCCGT GATGTGCTCACCCCTTACGCCAAAGATATTGGTATCACCGTGCAAGGGGTTATTGGCTCGGCGAATGTCAAACGTCAGCT CGATAGGCTAAAAGAAAAGCCAGAAGTCGTTGTTGCAACGGCGGGTCGCTTATTGGAACTGATTCAGTCGCGTAAGTTGA AACTTGATGGGTTGCAAACGCTGGTTGTTGATGAAGCTGATGAAATGTTGCGTGATCCAGGATTTGATCAGGTTCGAGAG ATTGCGGCAGCAGCACCCGCCGAAGCACAATTGGCCTTTTTCTCGGCCACGCCAAGCCCTTATTTTAAGGAGCTGCATAA GTGGTTTGGTAAAACACCAGACATCATTGATGTTCGGGCAATTGATCGAACCCGTGGCGAAGTCAGGCATCTGTTTTTGC AGACGGATCGGGCGCATCAGGTTGATTGGTTACGCACCTTAGCCCATACCGATGGCTTCAAAGCCTTGGTCTTCTTCAAT CAAAATTCGTCCTTGGAACGCGTGGCAGGGATCTTGCGTCATCAGGCGGTTCGCTTTGCAGTCTTGTCACGCGAAGGCCG GCAAACGGTTCGACAGAAGGCATTGACTGATTTTCGGCGCGGACGAATTACGCTCTTGCTGGTGACCGATATGGCAGGGC GCGGATTGGATATTCCTAAGTTGCCGGCTGTGGTAAACTTTGAACCACCGAAGCGCGCGGAAGTTTACATCCATCGGGCT GGGCGGACTGGCCGGATGGGTGAAGCAGGTCTGGTTGTGACCTTGGGGGATGATCATGATCGCCGCGACCTCAGCAAGCT GGTACCGCAGTATCATATTCATCGCGGCTATATGTCAGAGGGCAAGCTTGTGGACACGCCGCCAGCTAAAAAAGTGTCCG AGGCGTCGGCACCAACGACGGTGGAAAAGCTTGCATCGCCAGTTGCTAAGCAGCAGCCAGTTAAGCCAGAAGTGGCGCAA GAACCAGCCGTTCGTCCGCGCCGCAAGCATAAGAAACATCGCCTGCGAGATCAGCGGAATAAAGGCAAGCACAAGGATAA CGCATAA
Upstream 100 bases:
>100_bases AGCGCTTTTGACAAGGCATGGCAGCTCGCCAAAGAGGTTCATCAGGTCATGTCAATTCTGCGGACCTCCGCAAATCTGGA TTTTTAGTGAGGACAATATT
Downstream 100 bases:
>100_bases TGCAGCATCAGATGTATGATGAAGATAAGGGGGCAGTCATGGTGAGTATGAAAGCAGAACAAATGGCTGCCATGATGACA TTGATGAGCGCTGCCGGTGA
Product: superfamily II DNA/RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTIATPFQKRWQAAGYTEQTPIQTAVYQPLKADEDVVGLAPTGSGKTLAFGLPLLEKMVPGDGLQLLILAPSQELAIQTR DVLTPYAKDIGITVQGVIGSANVKRQLDRLKEKPEVVVATAGRLLELIQSRKLKLDGLQTLVVDEADEMLRDPGFDQVRE IAAAAPAEAQLAFFSATPSPYFKELHKWFGKTPDIIDVRAIDRTRGEVRHLFLQTDRAHQVDWLRTLAHTDGFKALVFFN QNSSLERVAGILRHQAVRFAVLSREGRQTVRQKALTDFRRGRITLLLVTDMAGRGLDIPKLPAVVNFEPPKRAEVYIHRA GRTGRMGEAGLVVTLGDDHDRRDLSKLVPQYHIHRGYMSEGKLVDTPPAKKVSEASAPTTVEKLASPVAKQQPVKPEVAQ EPAVRPRRKHKKHRLRDQRNKGKHKDNA
Sequences:
>Translated_428_residues MTIATPFQKRWQAAGYTEQTPIQTAVYQPLKADEDVVGLAPTGSGKTLAFGLPLLEKMVPGDGLQLLILAPSQELAIQTR DVLTPYAKDIGITVQGVIGSANVKRQLDRLKEKPEVVVATAGRLLELIQSRKLKLDGLQTLVVDEADEMLRDPGFDQVRE IAAAAPAEAQLAFFSATPSPYFKELHKWFGKTPDIIDVRAIDRTRGEVRHLFLQTDRAHQVDWLRTLAHTDGFKALVFFN QNSSLERVAGILRHQAVRFAVLSREGRQTVRQKALTDFRRGRITLLLVTDMAGRGLDIPKLPAVVNFEPPKRAEVYIHRA GRTGRMGEAGLVVTLGDDHDRRDLSKLVPQYHIHRGYMSEGKLVDTPPAKKVSEASAPTTVEKLASPVAKQQPVKPEVAQ EPAVRPRRKHKKHRLRDQRNKGKHKDNA >Mature_427_residues TIATPFQKRWQAAGYTEQTPIQTAVYQPLKADEDVVGLAPTGSGKTLAFGLPLLEKMVPGDGLQLLILAPSQELAIQTRD VLTPYAKDIGITVQGVIGSANVKRQLDRLKEKPEVVVATAGRLLELIQSRKLKLDGLQTLVVDEADEMLRDPGFDQVREI AAAAPAEAQLAFFSATPSPYFKELHKWFGKTPDIIDVRAIDRTRGEVRHLFLQTDRAHQVDWLRTLAHTDGFKALVFFNQ NSSLERVAGILRHQAVRFAVLSREGRQTVRQKALTDFRRGRITLLLVTDMAGRGLDIPKLPAVVNFEPPKRAEVYIHRAG RTGRMGEAGLVVTLGDDHDRRDLSKLVPQYHIHRGYMSEGKLVDTPPAKKVSEASAPTTVEKLASPVAKQQPVKPEVAQE PAVRPRRKHKKHRLRDQRNKGKHKDNA
Specific function: Has A Helix-Destabilizing Activity. Plays A Key Role In Optimal Cell Growth At Low Temperature And Is Required For Normal Cell Division. Suppressor Of A Mutant Defective In Rpsb Gene For Ribosomal Protein S2. [C]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=334, Percent_Identity=32.6347305389222, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI45446743, Length=334, Percent_Identity=32.6347305389222, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=32.5905292479109, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI222352149, Length=348, Percent_Identity=31.0344827586207, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI164664518, Length=339, Percent_Identity=29.7935103244838, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI20149629, Length=329, Percent_Identity=31.306990881459, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI7661920, Length=346, Percent_Identity=30.0578034682081, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI41327771, Length=360, Percent_Identity=30.8333333333333, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI51094101, Length=341, Percent_Identity=30.791788856305, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI164419743, Length=341, Percent_Identity=30.791788856305, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI13514831, Length=331, Percent_Identity=32.9305135951662, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI50659095, Length=394, Percent_Identity=30.4568527918782, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI21071032, Length=338, Percent_Identity=32.2485207100592, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI31542656, Length=337, Percent_Identity=31.7507418397626, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI41327773, Length=336, Percent_Identity=30.0595238095238, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI148613856, Length=351, Percent_Identity=30.1994301994302, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI38201710, Length=351, Percent_Identity=30.1994301994302, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI13129006, Length=343, Percent_Identity=30.0291545189504, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI301171467, Length=346, Percent_Identity=30.635838150289, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI87196351, Length=346, Percent_Identity=30.635838150289, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI301171475, Length=346, Percent_Identity=30.635838150289, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI4758138, Length=351, Percent_Identity=30.4843304843305, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI262118318, Length=347, Percent_Identity=30.5475504322767, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI169881239, Length=346, Percent_Identity=30.3468208092486, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI13514809, Length=346, Percent_Identity=30.3468208092486, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI216548263, Length=347, Percent_Identity=30.5475504322767, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI262231852, Length=347, Percent_Identity=30.5475504322767, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI13518015, Length=347, Percent_Identity=30.5475504322767, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI83700235, Length=344, Percent_Identity=29.3604651162791, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI38327634, Length=335, Percent_Identity=32.2388059701493, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=27.8089887640449, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=28.5714285714286, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=26.8011527377522, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI41327779, Length=343, Percent_Identity=30.0291545189504, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI188035877, Length=344, Percent_Identity=29.9418604651163, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI9966805, Length=342, Percent_Identity=30.1169590643275, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI41327776, Length=328, Percent_Identity=28.6585365853659, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=29.5264623955432, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=29.2479108635098, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI21040371, Length=337, Percent_Identity=27.893175074184, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI164419732, Length=341, Percent_Identity=28.4457478005865, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI256773275, Length=352, Percent_Identity=30.6818181818182, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI8922886, Length=365, Percent_Identity=27.3972602739726, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI4758112, Length=331, Percent_Identity=27.190332326284, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI18375623, Length=331, Percent_Identity=27.190332326284, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=27.2206303724928, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI6005743, Length=365, Percent_Identity=27.1232876712329, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI62241022, Length=363, Percent_Identity=26.9972451790634, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI154759257, Length=404, Percent_Identity=26.2376237623762, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=26.302729528536, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI17505907, Length=164, Percent_Identity=33.5365853658537, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI20336298, Length=164, Percent_Identity=33.5365853658537, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI87082221, Length=351, Percent_Identity=34.4729344729345, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1787016, Length=352, Percent_Identity=36.6477272727273, Blast_Score=172, Evalue=4e-44, Organism=Escherichia coli, GI1788930, Length=345, Percent_Identity=31.5942028985507, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1787605, Length=325, Percent_Identity=35.3846153846154, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1790214, Length=333, Percent_Identity=30.3303303303303, Blast_Score=142, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=31.331592689295, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI71999644, Length=330, Percent_Identity=29.6969696969697, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71999646, Length=330, Percent_Identity=29.6969696969697, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=31.9559228650138, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=31.9559228650138, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=31.9559228650138, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17555296, Length=343, Percent_Identity=28.5714285714286, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI115532546, Length=333, Percent_Identity=31.2312312312312, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI115532548, Length=352, Percent_Identity=29.8295454545455, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=27.6881720430108, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17507121, Length=347, Percent_Identity=30.2593659942363, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71995724, Length=346, Percent_Identity=28.9017341040462, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71987143, Length=340, Percent_Identity=27.3529411764706, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI86570094, Length=335, Percent_Identity=32.2388059701493, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17509811, Length=328, Percent_Identity=32.9268292682927, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI115533224, Length=332, Percent_Identity=28.9156626506024, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=29.3650793650794, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI32565321, Length=358, Percent_Identity=30.7262569832402, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=30.2139037433155, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17505370, Length=344, Percent_Identity=31.6860465116279, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=30.3523035230352, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17537549, Length=357, Percent_Identity=28.5714285714286, Blast_Score=134, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17556951, Length=341, Percent_Identity=31.0850439882698, Blast_Score=134, Evalue=9e-32, Organism=Caenorhabditis elegans, GI71982858, Length=328, Percent_Identity=29.5731707317073, Blast_Score=134, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=28.8409703504043, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17552642, Length=348, Percent_Identity=30.7471264367816, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=27.8061224489796, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI32564046, Length=391, Percent_Identity=27.6214833759591, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71997889, Length=360, Percent_Identity=28.8888888888889, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17507879, Length=378, Percent_Identity=28.5714285714286, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17507945, Length=318, Percent_Identity=31.4465408805031, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17508543, Length=369, Percent_Identity=28.7262872628726, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71990816, Length=365, Percent_Identity=28.2191780821918, Blast_Score=121, Evalue=9e-28, Organism=Caenorhabditis elegans, GI193206561, Length=306, Percent_Identity=27.1241830065359, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17553716, Length=357, Percent_Identity=24.6498599439776, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17536099, Length=350, Percent_Identity=23.7142857142857, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17536101, Length=350, Percent_Identity=23.7142857142857, Blast_Score=95, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17536103, Length=346, Percent_Identity=24.8554913294798, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71982862, Length=171, Percent_Identity=34.5029239766082, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71987152, Length=93, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323021, Length=347, Percent_Identity=31.700288184438, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6321360, Length=345, Percent_Identity=33.9130434782609, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320041, Length=336, Percent_Identity=30.952380952381, Blast_Score=162, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6324217, Length=351, Percent_Identity=30.4843304843305, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6321856, Length=333, Percent_Identity=30.3303303303303, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6323947, Length=341, Percent_Identity=31.3782991202346, Blast_Score=146, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6320224, Length=352, Percent_Identity=28.9772727272727, Blast_Score=143, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6324620, Length=330, Percent_Identity=27.8787878787879, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322427, Length=347, Percent_Identity=31.4121037463977, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=29.973474801061, Blast_Score=139, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6324778, Length=345, Percent_Identity=31.304347826087, Blast_Score=138, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6320449, Length=361, Percent_Identity=29.6398891966759, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321111, Length=357, Percent_Identity=27.4509803921569, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6322912, Length=310, Percent_Identity=28.0645161290323, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6322323, Length=310, Percent_Identity=28.0645161290323, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6325138, Length=358, Percent_Identity=27.9329608938547, Blast_Score=123, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6319618, Length=395, Percent_Identity=25.8227848101266, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6319714, Length=350, Percent_Identity=26.8571428571429, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6320119, Length=336, Percent_Identity=26.7857142857143, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6321267, Length=321, Percent_Identity=26.1682242990654, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6323306, Length=393, Percent_Identity=24.6819338422392, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320173, Length=208, Percent_Identity=32.6923076923077, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6320400, Length=349, Percent_Identity=24.0687679083095, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24662330, Length=347, Percent_Identity=32.2766570605187, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=31.5642458100559, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24583281, Length=343, Percent_Identity=28.8629737609329, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI24583279, Length=343, Percent_Identity=28.8629737609329, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI24642151, Length=337, Percent_Identity=31.7507418397626, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24585582, Length=335, Percent_Identity=31.6417910447761, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI17136814, Length=355, Percent_Identity=31.2676056338028, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI24644479, Length=349, Percent_Identity=30.6590257879656, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI281361218, Length=331, Percent_Identity=31.7220543806647, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24644481, Length=331, Percent_Identity=31.7220543806647, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24644483, Length=331, Percent_Identity=31.7220543806647, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24644487, Length=331, Percent_Identity=31.7220543806647, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI45551833, Length=331, Percent_Identity=31.7220543806647, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24644485, Length=331, Percent_Identity=31.7220543806647, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24645031, Length=346, Percent_Identity=29.1907514450867, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI21355075, Length=335, Percent_Identity=29.5522388059701, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI18857967, Length=341, Percent_Identity=31.0850439882698, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI28574962, Length=336, Percent_Identity=30.0595238095238, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24584994, Length=361, Percent_Identity=30.1939058171745, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI28575014, Length=334, Percent_Identity=30.5389221556886, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI28571808, Length=347, Percent_Identity=31.1239193083574, Blast_Score=141, Evalue=7e-34, Organism=Drosophila melanogaster, GI28571809, Length=347, Percent_Identity=31.1239193083574, Blast_Score=141, Evalue=7e-34, Organism=Drosophila melanogaster, GI17977678, Length=339, Percent_Identity=30.9734513274336, Blast_Score=141, Evalue=8e-34, Organism=Drosophila melanogaster, GI24584399, Length=345, Percent_Identity=28.695652173913, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI17985987, Length=364, Percent_Identity=29.9450549450549, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI24582080, Length=344, Percent_Identity=28.1976744186047, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI24582078, Length=344, Percent_Identity=28.1976744186047, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI17136248, Length=344, Percent_Identity=28.1976744186047, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI24582075, Length=344, Percent_Identity=28.1976744186047, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI21355559, Length=345, Percent_Identity=31.5942028985507, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI24666101, Length=354, Percent_Identity=27.1186440677966, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI19920478, Length=337, Percent_Identity=28.1899109792285, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI17647335, Length=331, Percent_Identity=25.6797583081571, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI281365720, Length=297, Percent_Identity=28.6195286195286, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI20130173, Length=305, Percent_Identity=28.8524590163934, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24581954, Length=335, Percent_Identity=28.3582089552239, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24581952, Length=335, Percent_Identity=28.3582089552239, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24581956, Length=335, Percent_Identity=28.3582089552239, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24642822, Length=360, Percent_Identity=28.8888888888889, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24643725, Length=361, Percent_Identity=26.3157894736842, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI28571338, Length=408, Percent_Identity=26.7156862745098, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI18859659, Length=408, Percent_Identity=26.7156862745098, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24640164, Length=335, Percent_Identity=25.0746268656716, Blast_Score=89, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47669; Mature: 47537
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIATPFQKRWQAAGYTEQTPIQTAVYQPLKADEDVVGLAPTGSGKTLAFGLPLLEKMVP CCCCCCHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCEEEECCHHHHHHCC GDGLQLLILAPSQELAIQTRDVLTPYAKDIGITVQGVIGSANVKRQLDRLKEKPEVVVAT CCCCEEEEECCCHHHHHHHHHHHCHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCEEEEH AGRLLELIQSRKLKLDGLQTLVVDEADEMLRDPGFDQVREIAAAAPAEAQLAFFSATPSP HHHHHHHHHHCCCCCCCHHEEEHHCHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCH YFKELHKWFGKTPDIIDVRAIDRTRGEVRHLFLQTDRAHQVDWLRTLAHTDGFKALVFFN HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEC QNSSLERVAGILRHQAVRFAVLSREGRQTVRQKALTDFRRGRITLLLVTDMAGRGLDIPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC LPAVVNFEPPKRAEVYIHRAGRTGRMGEAGLVVTLGDDHDRRDLSKLVPQYHIHRGYMSE CCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCC GKLVDTPPAKKVSEASAPTTVEKLASPVAKQQPVKPEVAQEPAVRPRRKHKKHRLRDQRN CCEECCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH KGKHKDNA CCCCCCCC >Mature Secondary Structure TIATPFQKRWQAAGYTEQTPIQTAVYQPLKADEDVVGLAPTGSGKTLAFGLPLLEKMVP CCCCCHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCEEEECCHHHHHHCC GDGLQLLILAPSQELAIQTRDVLTPYAKDIGITVQGVIGSANVKRQLDRLKEKPEVVVAT CCCCEEEEECCCHHHHHHHHHHHCHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCEEEEH AGRLLELIQSRKLKLDGLQTLVVDEADEMLRDPGFDQVREIAAAAPAEAQLAFFSATPSP HHHHHHHHHHCCCCCCCHHEEEHHCHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCH YFKELHKWFGKTPDIIDVRAIDRTRGEVRHLFLQTDRAHQVDWLRTLAHTDGFKALVFFN HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEC QNSSLERVAGILRHQAVRFAVLSREGRQTVRQKALTDFRRGRITLLLVTDMAGRGLDIPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC LPAVVNFEPPKRAEVYIHRAGRTGRMGEAGLVVTLGDDHDRRDLSKLVPQYHIHRGYMSE CCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCC GKLVDTPPAKKVSEASAPTTVEKLASPVAKQQPVKPEVAQEPAVRPRRKHKKHRLRDQRN CCEECCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH KGKHKDNA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]