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The map label for this gene is ygjR [H]

Identifier: 116494577

GI number: 116494577

Start: 1060939

End: 1061892

Strand: Direct

Name: ygjR [H]

Synonym: LSEI_1075

Alternate gene names: 116494577

Gene position: 1060939-1061892 (Clockwise)

Preceding gene: 116494575

Following gene: 116494578

Centisome position: 36.64

GC content: 47.48

Gene sequence:

>954_bases
ATGTTAAAACTCGGTGTGATTGGAACAGGTTGGATCACCAAGCAATTCGTGGCGGCAGCGATGGCGACGAAAGCTTATCA
GCTCACCGCTGTTTATTCGCGACATCAGGAAAGCGCGCAATCATTTATTGACAGCACGGCACCAGCTACTGCTTATACGA
CGATGGATGCTTTTCTTGGCAGTGATATCGATGTTGTTTACATTGCCAGTCCAAATAGTTTGCATGCGTCTCAAGCGTTG
GCAGCGTTAGACGCCGATAAGCATGTAATCGTGGAGAAACCATTGGTTGCCACGACCATGGAGTTTGAAAAGTTGGACGA
AGCGTTGCGGAAGAAACCTTCTTTATATCTGTTTGAGGCAGCGCGTCACGTGTATGAACACAACTTTGAAGTCGTCAATG
ATTTCACCCACAGTCAACCGGTTGATGGGGCCACCTTAACGTATATGAAGTATTCGTCAAAATACGATGCCTTTTTAGCT
GGCAAGTTGCCGAATGTGTTTAATCCTGAATTTGCCGGCGGCGCTTTAATGGACCTCGGTATTTACCTTGTATATGATGC
GATTGCGTGGTTTGGTGTACCTGAGAATGCCGTTTATTTGCCGCATTTTCTCAAAAGCGGGATTGACGGCGATGGCGTTG
CTCGGCTCGACTATGGTAAGTTTGCGGTGACATTGATCACGGGTAAAACGACTAATAGCGAGTTGCCGTCAGAAATTTAT
TCTGGCAAGCAAACATTGATGATGGACAACGCTGCTGAGCTGGAGACCGTTAAGCTCGGTGATCAAGTGCTGAGCACAGA
AAAGTTGGCTAATCCGATGGAAGCTGAGGCAGCCTATTTTGCAAAAGCAATTGTCGGCAAGGACCGCAGCGCTTTTGACA
AGGCATGGCAGCTCGCCAAAGAGGTTCATCAGGTCATGTCAATTCTGCGGACCTCCGCAAATCTGGATTTTTAG

Upstream 100 bases:

>100_bases
GGTTTCGCGGTGTCTGGCATGTGCATCAGCACGTTAAAAAACAGAGCACGATTCAGCCAGTTTCTGAGCTGAATGGCGTG
TCTGAAAAGGGGGATTTGCC

Downstream 100 bases:

>100_bases
TGAGGACAATATTGTGACAATTGCAACCCCGTTCCAAAAACGCTGGCAAGCAGCCGGCTATACTGAACAGACGCCGATTC
AAACCGCCGTGTATCAACCA

Product: dehydrogenase related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MLKLGVIGTGWITKQFVAAAMATKAYQLTAVYSRHQESAQSFIDSTAPATAYTTMDAFLGSDIDVVYIASPNSLHASQAL
AALDADKHVIVEKPLVATTMEFEKLDEALRKKPSLYLFEAARHVYEHNFEVVNDFTHSQPVDGATLTYMKYSSKYDAFLA
GKLPNVFNPEFAGGALMDLGIYLVYDAIAWFGVPENAVYLPHFLKSGIDGDGVARLDYGKFAVTLITGKTTNSELPSEIY
SGKQTLMMDNAAELETVKLGDQVLSTEKLANPMEAEAAYFAKAIVGKDRSAFDKAWQLAKEVHQVMSILRTSANLDF

Sequences:

>Translated_317_residues
MLKLGVIGTGWITKQFVAAAMATKAYQLTAVYSRHQESAQSFIDSTAPATAYTTMDAFLGSDIDVVYIASPNSLHASQAL
AALDADKHVIVEKPLVATTMEFEKLDEALRKKPSLYLFEAARHVYEHNFEVVNDFTHSQPVDGATLTYMKYSSKYDAFLA
GKLPNVFNPEFAGGALMDLGIYLVYDAIAWFGVPENAVYLPHFLKSGIDGDGVARLDYGKFAVTLITGKTTNSELPSEIY
SGKQTLMMDNAAELETVKLGDQVLSTEKLANPMEAEAAYFAKAIVGKDRSAFDKAWQLAKEVHQVMSILRTSANLDF
>Mature_317_residues
MLKLGVIGTGWITKQFVAAAMATKAYQLTAVYSRHQESAQSFIDSTAPATAYTTMDAFLGSDIDVVYIASPNSLHASQAL
AALDADKHVIVEKPLVATTMEFEKLDEALRKKPSLYLFEAARHVYEHNFEVVNDFTHSQPVDGATLTYMKYSSKYDAFLA
GKLPNVFNPEFAGGALMDLGIYLVYDAIAWFGVPENAVYLPHFLKSGIDGDGVARLDYGKFAVTLITGKTTNSELPSEIY
SGKQTLMMDNAAELETVKLGDQVLSTEKLANPMEAEAAYFAKAIVGKDRSAFDKAWQLAKEVHQVMSILRTSANLDF

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI145693182, Length=291, Percent_Identity=38.4879725085911, Blast_Score=185, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34741; Mature: 34741

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLGVIGTGWITKQFVAAAMATKAYQLTAVYSRHQESAQSFIDSTAPATAYTTMDAFLG
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
SDIDVVYIASPNSLHASQALAALDADKHVIVEKPLVATTMEFEKLDEALRKKPSLYLFEA
CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEHHHH
ARHVYEHNFEVVNDFTHSQPVDGATLTYMKYSSKYDAFLAGKLPNVFNPEFAGGALMDLG
HHHHHHCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHH
IYLVYDAIAWFGVPENAVYLPHFLKSGIDGDGVARLDYGKFAVTLITGKTTNSELPSEIY
HHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHH
SGKQTLMMDNAAELETVKLGDQVLSTEKLANPMEAEAAYFAKAIVGKDRSAFDKAWQLAK
CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EVHQVMSILRTSANLDF
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKLGVIGTGWITKQFVAAAMATKAYQLTAVYSRHQESAQSFIDSTAPATAYTTMDAFLG
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
SDIDVVYIASPNSLHASQALAALDADKHVIVEKPLVATTMEFEKLDEALRKKPSLYLFEA
CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEHHHH
ARHVYEHNFEVVNDFTHSQPVDGATLTYMKYSSKYDAFLAGKLPNVFNPEFAGGALMDLG
HHHHHHCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHH
IYLVYDAIAWFGVPENAVYLPHFLKSGIDGDGVARLDYGKFAVTLITGKTTNSELPSEIY
HHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHH
SGKQTLMMDNAAELETVKLGDQVLSTEKLANPMEAEAAYFAKAIVGKDRSAFDKAWQLAK
CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EVHQVMSILRTSANLDF
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]