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The map label for this gene is yidA [H]

Identifier: 116494565

GI number: 116494565

Start: 1048267

End: 1049079

Strand: Direct

Name: yidA [H]

Synonym: LSEI_1063

Alternate gene names: 116494565

Gene position: 1048267-1049079 (Clockwise)

Preceding gene: 116494564

Following gene: 116494567

Centisome position: 36.21

GC content: 51.78

Gene sequence:

>813_bases
TTGCGTTATCGACTGATTTTAAGTGACATTGACGGGACGCTGCTGAATTCAAACCACCAGTTGACCGATGAAGTTAAAAC
GGCCATCAAAGATTACGCGGCTGCTGGCGGAACCTTTGTGCTGGCTTCTGCGCGGCCGCCTTTGGCCATGACCGCTTTGG
CACATCAGATGGGTCTCGACGTGCCACTTGCCAGTCTCAACGGCGCCGTCATTTGCCAACCGCAACATGGCGATTTAAAA
ATCCTGTCCGCAACGCCTTGGCCCGCTGGCATTGGTAGCCAGGCATACGAAGCGTTAGCTAAACTGGCACTCAGTCTGAA
TATTTTCAGTGGCGCGCATTGGTATGTGAACGTGGTGGATGCGTGGGTCCAACAAGAAGCCGCAATCACAGGCTTTGGCG
CAGAAACTGCGCCTATGGAACAAATGCTGGCGGAAGGATTGCCAGTGCATAAAATGCTGTGCATGGGTGAGCCTGCTGTG
GTTGATCGCGCGGAAGCCATCATTCTTGCCCATCCAGAGTGGCAATTGGTCGCTAGCCGTTCGAAACGAACCTATCTAGA
AATTGTGCGGCAAGGCGTGTCAAAAGAAGCCGCTCTTCGCCAACTCAGTGACTTGTTTGCCATCCCCATGACTGAGACGA
TGGCGTTGGGCGATGGTGAAAATGATTTGCCAATGTTAAAAACTGCTGCACTTGGGGTGACCTTGGCCAATGGGTTGCCT
GTGGTATTAGATGCAATTAAAACTGTTGTCCCTGACAACGATCATGATGGTGCAGCAGTCGCCATCAGAAAATATGCGAT
GGCCAAAGCATAA

Upstream 100 bases:

>100_bases
CCGGCCCTGAACGATCCATTGCACCAAGTTACCCACCAGCAGTCGTGAAGGCTGAAAAGAATCGTTCGAGGGGATTATGA
AAAAGAGAGGGGATTTTGAC

Downstream 100 bases:

>100_bases
TCAAAAAGGCGCCTTGACAGGATTCAATTTTGTCGAGGCGTCTTTTTATTCTGTATAAAATAGTTTTAAACGAATCTATT
TAGTCTTTCAAAGCCTCAAC

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRYRLILSDIDGTLLNSNHQLTDEVKTAIKDYAAAGGTFVLASARPPLAMTALAHQMGLDVPLASLNGAVICQPQHGDLK
ILSATPWPAGIGSQAYEALAKLALSLNIFSGAHWYVNVVDAWVQQEAAITGFGAETAPMEQMLAEGLPVHKMLCMGEPAV
VDRAEAIILAHPEWQLVASRSKRTYLEIVRQGVSKEAALRQLSDLFAIPMTETMALGDGENDLPMLKTAALGVTLANGLP
VVLDAIKTVVPDNDHDGAAVAIRKYAMAKA

Sequences:

>Translated_270_residues
MRYRLILSDIDGTLLNSNHQLTDEVKTAIKDYAAAGGTFVLASARPPLAMTALAHQMGLDVPLASLNGAVICQPQHGDLK
ILSATPWPAGIGSQAYEALAKLALSLNIFSGAHWYVNVVDAWVQQEAAITGFGAETAPMEQMLAEGLPVHKMLCMGEPAV
VDRAEAIILAHPEWQLVASRSKRTYLEIVRQGVSKEAALRQLSDLFAIPMTETMALGDGENDLPMLKTAALGVTLANGLP
VVLDAIKTVVPDNDHDGAAVAIRKYAMAKA
>Mature_270_residues
MRYRLILSDIDGTLLNSNHQLTDEVKTAIKDYAAAGGTFVLASARPPLAMTALAHQMGLDVPLASLNGAVICQPQHGDLK
ILSATPWPAGIGSQAYEALAKLALSLNIFSGAHWYVNVVDAWVQQEAAITGFGAETAPMEQMLAEGLPVHKMLCMGEPAV
VDRAEAIILAHPEWQLVASRSKRTYLEIVRQGVSKEAALRQLSDLFAIPMTETMALGDGENDLPMLKTAALGVTLANGLP
VVLDAIKTVVPDNDHDGAAVAIRKYAMAKA

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=286, Percent_Identity=27.6223776223776, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28745; Mature: 28745

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRLILSDIDGTLLNSNHQLTDEVKTAIKDYAAAGGTFVLASARPPLAMTALAHQMGLD
CCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCC
VPLASLNGAVICQPQHGDLKILSATPWPAGIGSQAYEALAKLALSLNIFSGAHWYVNVVD
CCHHHCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHH
AWVQQEAAITGFGAETAPMEQMLAEGLPVHKMLCMGEPAVVDRAEAIILAHPEWQLVASR
HHHHHHHHEECCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCC
SKRTYLEIVRQGVSKEAALRQLSDLFAIPMTETMALGDGENDLPMLKTAALGVTLANGLP
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHHHHHHEEECCCCH
VVLDAIKTVVPDNDHDGAAVAIRKYAMAKA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRYRLILSDIDGTLLNSNHQLTDEVKTAIKDYAAAGGTFVLASARPPLAMTALAHQMGLD
CCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCC
VPLASLNGAVICQPQHGDLKILSATPWPAGIGSQAYEALAKLALSLNIFSGAHWYVNVVD
CCHHHCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHH
AWVQQEAAITGFGAETAPMEQMLAEGLPVHKMLCMGEPAVVDRAEAIILAHPEWQLVASR
HHHHHHHHEECCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCC
SKRTYLEIVRQGVSKEAALRQLSDLFAIPMTETMALGDGENDLPMLKTAALGVTLANGLP
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHHHHHHEEECCCCH
VVLDAIKTVVPDNDHDGAAVAIRKYAMAKA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]