| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is glmM
Identifier: 116494522
GI number: 116494522
Start: 1003608
End: 1004972
Strand: Direct
Name: glmM
Synonym: LSEI_1018
Alternate gene names: 116494522
Gene position: 1003608-1004972 (Clockwise)
Preceding gene: 116494521
Following gene: 116494523
Centisome position: 34.66
GC content: 47.25
Gene sequence:
>1365_bases ATGACAAAGTATTTTGGTACTGATGGCGTTCGTGGCATTGCAAACAAGGAACTAAGTCCGGAAATGGCTTTCCGGCTAGG GCGGACAGGCGGCTATGTTTTGACGCAGCACAAAGAAGATGCGAGTCGACGCCCATTGGTTTTGGTTGCTCGCGATACAC GAATCTCAGGGCAGATGTTGGCTGATGCTTTAATTGCTGGCTTGCTTTCTGTTGGGATTGAAGTGCTGGATTTAGGCGTG ATCACAACGCCTGCTGTTGCTTATTTAATCAAGATTCAAGGCGCCGATGCTGGTATCCAGATTTCGGCGTCGCATAATCC GGTTGCCGATAATGGCATCAAGTTCTTTGGAGCGGACGGCTACAAATTGTCTGACGATACTGAAGAAGAAATTGAAGCCT TACTGGATGCACCAGAAGACAAACTTCCACGGCCAGCTGCTGAAGGATTAGGTACAGTAGACGATTATCCTGAAGGCGCA CTCAAGTACACCCAATTTCTTGAGCAAACCTTGGCAGATGATCTGAGTGGCATTCATGTGTGCTTGGATGGCGCAAATGG TGCAACGAGTGGGTTAGTTAGTCGAATTTTTGCTGATCTTGAGACCGATTTTGATACAATGGCAATCAGTCCAGATGGGC TTAATATCAATGCTAACGTTGGTTCAACGCATCCGCAGGCGTTATCGAAATTTGTCGTCGAAAAAGGTGCTGATGTTGGC CTCGCGTTTGACGGTGACGGTGATCGCTGTATCGCAGTTGATGAACAAGGCAATATCGTTGATGGCGACAAGATTATGTT CATTCTCGGTAGTTATATGAAGTCACAGGGCCGGCTGAAGCAGGATACTGTCGTCACCACTGTTATGAGTAATCTTGGGT TATATAAGGCATTAGAAGCGAATGGCATGAAGTCCGTGCAAACGGCCGTCGGTGATCGCCACGTTGTCGAGGCCATGCGC AAAGATGGCTATAATATTGGCGGCGAACAGTCTGGCCACGTCATTTTGTTTGATTATCACAATACCGGGGATGGCATGCT AACAGGCATTCACTTGTTAAATGTCATGAAGAAAACCGGCAAGAAGTTGTCTGAATTAGCCGCACCTGTTCAAGACTATC CGCAGAAATTGGTTAATGTAAAAGTTGCGGACAAGGAAAATTGGCAAGCTTATCCAGAAATCCAAAGTGCCATTGATACC GTCGAAAAAGAAATGGCCGGTGATGGCCGTGTTCTGGTTCGCCCTTCAGGCACTGAACCTTTGTTGCGGGTCATGGCCGA AGCCAAAACCGAAGATTTGGTTTCCCGTTATGTGGATCAAATCGTGGATGTGGTGAAGCAAGAAATGGGCAGCAAGGAAG ATTAG
Upstream 100 bases:
>100_bases TTCGAGTTCGAGTGCCGCAAGCACCTCGAGTGCCAGTGAATCAGACTCAAGTACATCAACAAGCGACAATAATGGCTGAA AGAAATGAGGAAGAATTAAG
Downstream 100 bases:
>100_bases CTGCTGTCTTTATCAAAAATTTAAACTTTATTTTAACCGAGTTGTCACGGGTCTCATCGACAACTCGGTTTTTTTGTCTG GTGATAGCATTCGCAATTGG
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTKYFGTDGVRGIANKELSPEMAFRLGRTGGYVLTQHKEDASRRPLVLVARDTRISGQMLADALIAGLLSVGIEVLDLGV ITTPAVAYLIKIQGADAGIQISASHNPVADNGIKFFGADGYKLSDDTEEEIEALLDAPEDKLPRPAAEGLGTVDDYPEGA LKYTQFLEQTLADDLSGIHVCLDGANGATSGLVSRIFADLETDFDTMAISPDGLNINANVGSTHPQALSKFVVEKGADVG LAFDGDGDRCIAVDEQGNIVDGDKIMFILGSYMKSQGRLKQDTVVTTVMSNLGLYKALEANGMKSVQTAVGDRHVVEAMR KDGYNIGGEQSGHVILFDYHNTGDGMLTGIHLLNVMKKTGKKLSELAAPVQDYPQKLVNVKVADKENWQAYPEIQSAIDT VEKEMAGDGRVLVRPSGTEPLLRVMAEAKTEDLVSRYVDQIVDVVKQEMGSKED
Sequences:
>Translated_454_residues MTKYFGTDGVRGIANKELSPEMAFRLGRTGGYVLTQHKEDASRRPLVLVARDTRISGQMLADALIAGLLSVGIEVLDLGV ITTPAVAYLIKIQGADAGIQISASHNPVADNGIKFFGADGYKLSDDTEEEIEALLDAPEDKLPRPAAEGLGTVDDYPEGA LKYTQFLEQTLADDLSGIHVCLDGANGATSGLVSRIFADLETDFDTMAISPDGLNINANVGSTHPQALSKFVVEKGADVG LAFDGDGDRCIAVDEQGNIVDGDKIMFILGSYMKSQGRLKQDTVVTTVMSNLGLYKALEANGMKSVQTAVGDRHVVEAMR KDGYNIGGEQSGHVILFDYHNTGDGMLTGIHLLNVMKKTGKKLSELAAPVQDYPQKLVNVKVADKENWQAYPEIQSAIDT VEKEMAGDGRVLVRPSGTEPLLRVMAEAKTEDLVSRYVDQIVDVVKQEMGSKED >Mature_453_residues TKYFGTDGVRGIANKELSPEMAFRLGRTGGYVLTQHKEDASRRPLVLVARDTRISGQMLADALIAGLLSVGIEVLDLGVI TTPAVAYLIKIQGADAGIQISASHNPVADNGIKFFGADGYKLSDDTEEEIEALLDAPEDKLPRPAAEGLGTVDDYPEGAL KYTQFLEQTLADDLSGIHVCLDGANGATSGLVSRIFADLETDFDTMAISPDGLNINANVGSTHPQALSKFVVEKGADVGL AFDGDGDRCIAVDEQGNIVDGDKIMFILGSYMKSQGRLKQDTVVTTVMSNLGLYKALEANGMKSVQTAVGDRHVVEAMRK DGYNIGGEQSGHVILFDYHNTGDGMLTGIHLLNVMKKTGKKLSELAAPVQDYPQKLVNVKVADKENWQAYPEIQSAIDTV EKEMAGDGRVLVRPSGTEPLLRVMAEAKTEDLVSRYVDQIVDVVKQEMGSKED
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=448, Percent_Identity=42.4107142857143, Blast_Score=314, Evalue=7e-87, Organism=Escherichia coli, GI1788361, Length=456, Percent_Identity=26.5350877192982, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_LACC3 (Q03AF8)
Other databases:
- EMBL: CP000423 - RefSeq: YP_806256.1 - ProteinModelPortal: Q03AF8 - STRING: Q03AF8 - GeneID: 4421679 - GenomeReviews: CP000423_GR - KEGG: lca:LSEI_1018 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: SAVMIHE - PhylomeDB: Q03AF8 - ProtClustDB: PRK14316 - BioCyc: LCAS321967:LSEI_1018-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 48796; Mature: 48665
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 104-104
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYFGTDGVRGIANKELSPEMAFRLGRTGGYVLTQHKEDASRRPLVLVARDTRISGQML CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHH ADALIAGLLSVGIEVLDLGVITTPAVAYLIKIQGADAGIQISASHNPVADNGIKFFGADG HHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCC YKLSDDTEEEIEALLDAPEDKLPRPAAEGLGTVDDYPEGALKYTQFLEQTLADDLSGIHV CCCCCCCHHHHHHHHCCCHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE CLDGANGATSGLVSRIFADLETDFDTMAISPDGLNINANVGSTHPQALSKFVVEKGADVG EEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCEE LAFDGDGDRCIAVDEQGNIVDGDKIMFILGSYMKSQGRLKQDTVVTTVMSNLGLYKALEA EEECCCCCEEEEECCCCCEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHC NGMKSVQTAVGDRHVVEAMRKDGYNIGGEQSGHVILFDYHNTGDGMLTGIHLLNVMKKTG CCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH KKLSELAAPVQDYPQKLVNVKVADKENWQAYPEIQSAIDTVEKEMAGDGRVLVRPSGTEP HHHHHHHCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH LLRVMAEAKTEDLVSRYVDQIVDVVKQEMGSKED HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TKYFGTDGVRGIANKELSPEMAFRLGRTGGYVLTQHKEDASRRPLVLVARDTRISGQML CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHH ADALIAGLLSVGIEVLDLGVITTPAVAYLIKIQGADAGIQISASHNPVADNGIKFFGADG HHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCC YKLSDDTEEEIEALLDAPEDKLPRPAAEGLGTVDDYPEGALKYTQFLEQTLADDLSGIHV CCCCCCCHHHHHHHHCCCHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE CLDGANGATSGLVSRIFADLETDFDTMAISPDGLNINANVGSTHPQALSKFVVEKGADVG EEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCEE LAFDGDGDRCIAVDEQGNIVDGDKIMFILGSYMKSQGRLKQDTVVTTVMSNLGLYKALEA EEECCCCCEEEEECCCCCEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHC NGMKSVQTAVGDRHVVEAMRKDGYNIGGEQSGHVILFDYHNTGDGMLTGIHLLNVMKKTG CCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH KKLSELAAPVQDYPQKLVNVKVADKENWQAYPEIQSAIDTVEKEMAGDGRVLVRPSGTEP HHHHHHHCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH LLRVMAEAKTEDLVSRYVDQIVDVVKQEMGSKED HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA