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The map label for this gene is yhbH [C]

Identifier: 116494435

GI number: 116494435

Start: 905676

End: 906233

Strand: Direct

Name: yhbH [C]

Synonym: LSEI_0928

Alternate gene names: 116494435

Gene position: 905676-906233 (Clockwise)

Preceding gene: 116494434

Following gene: 116494436

Centisome position: 31.28

GC content: 47.13

Gene sequence:

>558_bases
ATGCTCACATACAATGTTCGTGGCGAAAACATCGAAGTCACCGAGGCCATCAGAAGTTACGTGGAGAAGCGGATTAGCAA
ACTGAACAAGTTCTTCGGAGGTTCGGTTACTGCAACGGCACACGTCAATTTGAAGGTTTATTCCGATAAAACTGCAAAAG
TTGAAGTGACCATCCCGTTGTCTTTCTTGACCCTGCGTGCTGAAGAAACCAGCCCGGATCTTTATGCCAGCATCGATCTC
GTGACCGACAAGCTGGAACGGCAGGTACGCAAGTTCAAGACAAAGATCAATCGCAAGTCACGTGAAAAAGGCTTTGGCCA
AATCGACATTGATGCGACTGCACCAGCTGAACCGAAACCAGCCGAAGATGATGATAATCTGACGGTTGTTCGTACTAAGC
GAGTGTCGTTGAAGCCGATGGATTCGCAAGAAGCCATTTTACAGATGGATATGTTGGGGCACAACTTCTTTATCTTTGAA
GATGCTGACACCAATGGCACAAGCATTGTTTATAAGCGGCGTGACGGGCGTTATGGCTTGATCGAAACCGACGAATAA

Upstream 100 bases:

>100_bases
AGACAACATTCGGGTATAATGAAATTGAAGATTGGAAGGGTTTTATCCCAACCAATCGACGTGTAAGTGTTTATTACACG
TAGGAAAGGGGAGAAGTTTT

Downstream 100 bases:

>100_bases
GCAGTTCTTAAAACAAAAAACAAGATCGCCGCAAAAGGTGATCTTGTTTTTTGTTGGGAAAGTTTGCCATATGGACTTAT
TGCTGGTAAGTTTTTATTAA

Product: ribosome-associated protein Y (PSrp-1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLTYNVRGENIEVTEAIRSYVEKRISKLNKFFGGSVTATAHVNLKVYSDKTAKVEVTIPLSFLTLRAEETSPDLYASIDL
VTDKLERQVRKFKTKINRKSREKGFGQIDIDATAPAEPKPAEDDDNLTVVRTKRVSLKPMDSQEAILQMDMLGHNFFIFE
DADTNGTSIVYKRRDGRYGLIETDE

Sequences:

>Translated_185_residues
MLTYNVRGENIEVTEAIRSYVEKRISKLNKFFGGSVTATAHVNLKVYSDKTAKVEVTIPLSFLTLRAEETSPDLYASIDL
VTDKLERQVRKFKTKINRKSREKGFGQIDIDATAPAEPKPAEDDDNLTVVRTKRVSLKPMDSQEAILQMDMLGHNFFIFE
DADTNGTSIVYKRRDGRYGLIETDE
>Mature_185_residues
MLTYNVRGENIEVTEAIRSYVEKRISKLNKFFGGSVTATAHVNLKVYSDKTAKVEVTIPLSFLTLRAEETSPDLYASIDL
VTDKLERQVRKFKTKINRKSREKGFGQIDIDATAPAEPKPAEDDDNLTVVRTKRVSLKPMDSQEAILQMDMLGHNFFIFE
DADTNGTSIVYKRRDGRYGLIETDE

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 20998; Mature: 20998

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTYNVRGENIEVTEAIRSYVEKRISKLNKFFGGSVTATAHVNLKVYSDKTAKVEVTIPL
CEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCEEEEEEEEE
SFLTLRAEETSPDLYASIDLVTDKLERQVRKFKTKINRKSREKGFGQIDIDATAPAEPKP
EEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCC
AEDDDNLTVVRTKRVSLKPMDSQEAILQMDMLGHNFFIFEDADTNGTSIVYKRRDGRYGL
CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCEEE
IETDE
EEECC
>Mature Secondary Structure
MLTYNVRGENIEVTEAIRSYVEKRISKLNKFFGGSVTATAHVNLKVYSDKTAKVEVTIPL
CEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCEEEEEEEEE
SFLTLRAEETSPDLYASIDLVTDKLERQVRKFKTKINRKSREKGFGQIDIDATAPAEPKP
EEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCC
AEDDDNLTVVRTKRVSLKPMDSQEAILQMDMLGHNFFIFEDADTNGTSIVYKRRDGRYGL
CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCEEE
IETDE
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA