| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494417
Identifier: 116494417
GI number: 116494417
Start: 885553
End: 885930
Strand: Direct
Name: 116494417
Synonym: LSEI_0909
Alternate gene names: NA
Gene position: 885553-885930 (Clockwise)
Preceding gene: 116494415
Following gene: 116494420
Centisome position: 30.59
GC content: 46.03
Gene sequence:
>378_bases ATGCAATTGACAGCAACAGTAACAGCTATTGGTAAGGATGCATTGAGTTCCAAGGATCCGATGATTATTCTCTTTGGACC GCAAGCAACAGACGCACTACGCGACGTCGCGGTGATCCAGCAGTTCGCTGACAAGTCAGCTTTGGAAAAATTGGTTATCA AGGCGGGCGACCAATTAACAATCGATGATGAGACGTTTGAGATGACTTATGTCGGTCAACTTGCTAACAGTAACCTGAAG GCGATTGGGCACGTTACCCTGTTGTTCCAAGCTGTACCAGCAGACAAGCCGATGCAAAACGCAATTTATTTAAAACCGAC CCATCGACCAACATTTAAGGTTGGGACGACACTAACTTACATCACGCAAGCCAACTAA
Upstream 100 bases:
>100_bases GCCATCATGGGCCTTAACGAGATCGCATTTATGTTGGCAGCGAAGCTCAGATAACAAACACTTATGATATTAAAAATGAC AGGCAAACGGAGGCACGACC
Downstream 100 bases:
>100_bases GTGTGACAACGAGTTCTTGGATCAGTTATGCGCCAGTTTCTAACCGCTTCTGCTTACGGTCAACAAAAAAAAGAAGATTT CAGGCGATCTATCAGCCTGA
Product: glucitol/sorbitol PTS, EIIA
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System Glucitol/Sorbitol-Specific IIA Component; PTS System Protein; PTS System IIA Component; PTS System Glucitol/Sorbitol-Specific IIa Component; Glucitol/Sorbitol Phosphotransferase System IIA; Phosphotransferase System II; PTS Family Glucitol Porter Component IIA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MQLTATVTAIGKDALSSKDPMIILFGPQATDALRDVAVIQQFADKSALEKLVIKAGDQLTIDDETFEMTYVGQLANSNLK AIGHVTLLFQAVPADKPMQNAIYLKPTHRPTFKVGTTLTYITQAN
Sequences:
>Translated_125_residues MQLTATVTAIGKDALSSKDPMIILFGPQATDALRDVAVIQQFADKSALEKLVIKAGDQLTIDDETFEMTYVGQLANSNLK AIGHVTLLFQAVPADKPMQNAIYLKPTHRPTFKVGTTLTYITQAN >Mature_125_residues MQLTATVTAIGKDALSSKDPMIILFGPQATDALRDVAVIQQFADKSALEKLVIKAGDQLTIDDETFEMTYVGQLANSNLK AIGHVTLLFQAVPADKPMQNAIYLKPTHRPTFKVGTTLTYITQAN
Specific function: Unknown
COG id: COG3731
COG function: function code G; Phosphotransferase system sorbitol-specific component IIA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 13579; Mature: 13579
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS51097 PTS_EIIA_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTATVTAIGKDALSSKDPMIILFGPQATDALRDVAVIQQFADKSALEKLVIKAGDQLT CCEEEEEEECCCHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEE IDDETFEMTYVGQLANSNLKAIGHVTLLFQAVPADKPMQNAIYLKPTHRPTFKVGTTLTY ECCCEEEEEEEEECCCCCCCHHHHEEEEEEECCCCCCCCCEEEEECCCCCCEEECCEEEE ITQAN EEECC >Mature Secondary Structure MQLTATVTAIGKDALSSKDPMIILFGPQATDALRDVAVIQQFADKSALEKLVIKAGDQLT CCEEEEEEECCCHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEE IDDETFEMTYVGQLANSNLKAIGHVTLLFQAVPADKPMQNAIYLKPTHRPTFKVGTTLTY ECCCEEEEEEEEECCCCCCCHHHHEEEEEEECCCCCCCCCEEEEECCCCCCEEECCEEEE ITQAN EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA