| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is tagE [H]
Identifier: 116494400
GI number: 116494400
Start: 867911
End: 869470
Strand: Direct
Name: tagE [H]
Synonym: LSEI_0892
Alternate gene names: 116494400
Gene position: 867911-869470 (Clockwise)
Preceding gene: 116494399
Following gene: 116494401
Centisome position: 29.98
GC content: 48.27
Gene sequence:
>1560_bases ATGTATTATTTTTTAAATGATCAAATGGCCTATGCCAAGTCTGGTATTGAAGGCGCGGAAATTCAGCGGTTGCAGCTTTT CAAAGCGAACCAGACGCCAGCAAAGATTGTTACCCGGCAATTTGCTTTAGATCTACACGATGTTTTGAAAGATGCAGGCA TTGACGATACTGATTTTATCAATCTGTTTGATTACTTTTGCGACCTGCTGAGCACACCGTGGCAGCAGGTAACGGTTGCA GACGTTTGCCAACCGACTGCGGGCGTGACCCGCCGGCGTGAAGGGCGGCAGGTGATCTTCAGCCGCGGTTCCCGAGTCAT TCGAATCGTTTATTTGCGCGAAAAGGCGGGGCGTGAGCAAGAGGTTAGCAATGTTCAATACTTTGATGTGACCGGCCGAA CGATCAAAATGAGTTGGTGGGACACGCGAGGCAACCATTGTTTGGATCAGTATTTTGATCAAGGCGGCAAAATCTTCCAA GAACATTATTTGAATCGTCATGGTCGCACGCGGCTTGAAAAACTGCATTATTTAAATCATAGCCAGCAAGAAAAATTTTC GTGGAAATTGGTTGATTTTCATGGTGTGGATTATCTATTTGATGGGCTTCATGATTTGACAAGGTTCTTCTATGATCAAC TGAATCAGGTAGATGGCGGCTATAATGTCTTCGTGTGCGATCGGACGACGGAAACTGGCTGGGGCTTGTTGCACATGACG ACACCGGCGCTCAAAGTTTTGCATCTGCACAATAACCATGTTGCCGGGAATGAGGACGTGCTGCATGCAAAGTTGAATAA TTTTTATGCTAGTGCCCTGACCCATTTGAATCGCTGGGACGCTGTGATTGTGCCGACACCGCAGCAGGCGCAGGATATGG CTGCCCGGTTTGGCACGGCCACGCCGATTTTCACGATTCGAGTTGCTTTTGTTAAGGCGGCAGATGTAGCGGCTAATCGC CTCCCGTTTTCACAACGCGAACAACATCTGGTGGTGCATGTTGCGCGATTGGCACCGGAAAAACAGCAGGCAAGTTCAAT TCGGGCATTTGCCCAAGTTGTGAAGGCCATTCCGGATGCTAAACTTGAACTCTGGGGTTATGCCAATGGTGATATGGCGC CGAAACTACATGCTCTGGTTGAAAAGCTGCATCTCGCGGATCACGTTTTCTTTAAGGGTTATACTCGCGACATAGCGGCC GTCTACAATCGCGCACAGTTAGGACTGTTGCCTTCCAGTGCCGAAGGATTTCCGCTAACCTTGATCGAAGCACAGGCGCA CGGATTACCGATGATCGCAAATGACATTCACTATGGGCCAGCCGATATTTTGGCCAACGGTAAAAGCGGGCTTTTGACGC AAAATGGTGACATTGATGGTTTAGCAAATGCAATCATTGGGTTATTGAATGATTCAACTAAGCTGGCCCAGTTTAGCGCG GCTGCCTATGACAATGCTTTGCGATTCACTGATACGAGCACATTTGTTCAGTGGCAGAAACTCATGGCGTTTGCGGCAAA GAAAAAGACAAGGCTGGCGGCCTTTGAGCATGTTGATTAG
Upstream 100 bases:
>100_bases ACTGGCGCAAAAGCAGCTAGCGCCTGAAAAAGTCTACGCCCGCTGGCAAGCATTTCTTGGACTGGACAGTTAACCCGACA AAACGGCAAGGAGGTTCAAG
Downstream 100 bases:
>100_bases GCACCGGTCATGGCAATGAGTGGCGTTTTTACTGACAACTGTTCAAAAAATGGTAGGATGAGGCGTAAGCTTTTACCAAG AAATGGAGGCTAACCAATGT
Product: glycosyltransferase
Products: NA
Alternate protein names: Major teichoic acid biosynthesis protein E [H]
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MYYFLNDQMAYAKSGIEGAEIQRLQLFKANQTPAKIVTRQFALDLHDVLKDAGIDDTDFINLFDYFCDLLSTPWQQVTVA DVCQPTAGVTRRREGRQVIFSRGSRVIRIVYLREKAGREQEVSNVQYFDVTGRTIKMSWWDTRGNHCLDQYFDQGGKIFQ EHYLNRHGRTRLEKLHYLNHSQQEKFSWKLVDFHGVDYLFDGLHDLTRFFYDQLNQVDGGYNVFVCDRTTETGWGLLHMT TPALKVLHLHNNHVAGNEDVLHAKLNNFYASALTHLNRWDAVIVPTPQQAQDMAARFGTATPIFTIRVAFVKAADVAANR LPFSQREQHLVVHVARLAPEKQQASSIRAFAQVVKAIPDAKLELWGYANGDMAPKLHALVEKLHLADHVFFKGYTRDIAA VYNRAQLGLLPSSAEGFPLTLIEAQAHGLPMIANDIHYGPADILANGKSGLLTQNGDIDGLANAIIGLLNDSTKLAQFSA AAYDNALRFTDTSTFVQWQKLMAFAAKKKTRLAAFEHVD
Sequences:
>Translated_519_residues MYYFLNDQMAYAKSGIEGAEIQRLQLFKANQTPAKIVTRQFALDLHDVLKDAGIDDTDFINLFDYFCDLLSTPWQQVTVA DVCQPTAGVTRRREGRQVIFSRGSRVIRIVYLREKAGREQEVSNVQYFDVTGRTIKMSWWDTRGNHCLDQYFDQGGKIFQ EHYLNRHGRTRLEKLHYLNHSQQEKFSWKLVDFHGVDYLFDGLHDLTRFFYDQLNQVDGGYNVFVCDRTTETGWGLLHMT TPALKVLHLHNNHVAGNEDVLHAKLNNFYASALTHLNRWDAVIVPTPQQAQDMAARFGTATPIFTIRVAFVKAADVAANR LPFSQREQHLVVHVARLAPEKQQASSIRAFAQVVKAIPDAKLELWGYANGDMAPKLHALVEKLHLADHVFFKGYTRDIAA VYNRAQLGLLPSSAEGFPLTLIEAQAHGLPMIANDIHYGPADILANGKSGLLTQNGDIDGLANAIIGLLNDSTKLAQFSA AAYDNALRFTDTSTFVQWQKLMAFAAKKKTRLAAFEHVD >Mature_519_residues MYYFLNDQMAYAKSGIEGAEIQRLQLFKANQTPAKIVTRQFALDLHDVLKDAGIDDTDFINLFDYFCDLLSTPWQQVTVA DVCQPTAGVTRRREGRQVIFSRGSRVIRIVYLREKAGREQEVSNVQYFDVTGRTIKMSWWDTRGNHCLDQYFDQGGKIFQ EHYLNRHGRTRLEKLHYLNHSQQEKFSWKLVDFHGVDYLFDGLHDLTRFFYDQLNQVDGGYNVFVCDRTTETGWGLLHMT TPALKVLHLHNNHVAGNEDVLHAKLNNFYASALTHLNRWDAVIVPTPQQAQDMAARFGTATPIFTIRVAFVKAADVAANR LPFSQREQHLVVHVARLAPEKQQASSIRAFAQVVKAIPDAKLELWGYANGDMAPKLHALVEKLHLADHVFFKGYTRDIAA VYNRAQLGLLPSSAEGFPLTLIEAQAHGLPMIANDIHYGPADILANGKSGLLTQNGDIDGLANAIIGLLNDSTKLAQFSA AAYDNALRFTDTSTFVQWQKLMAFAAKKKTRLAAFEHVD
Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015397 - InterPro: IPR001296 [H]
Pfam domain/function: PF09318 DUF1975; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.52 [H]
Molecular weight: Translated: 58612; Mature: 58612
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYFLNDQMAYAKSGIEGAEIQRLQLFKANQTPAKIVTRQFALDLHDVLKDAGIDDTDFI CEEEECCCHHHHHCCCCCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH NLFDYFCDLLSTPWQQVTVADVCQPTAGVTRRREGRQVIFSRGSRVIRIVYLREKAGREQ HHHHHHHHHHCCCHHHEEHHHHCCCCCCCHHCCCCCHHHHHCCCCEEEEEEEECCCCCCH EVSNVQYFDVTGRTIKMSWWDTRGNHCLDQYFDQGGKIFQEHYLNRHGRTRLEKLHYLNH HHCCEEEEEECCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCC SQQEKFSWKLVDFHGVDYLFDGLHDLTRFFYDQLNQVDGGYNVFVCDRTTETGWGLLHMT CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEC TPALKVLHLHNNHVAGNEDVLHAKLNNFYASALTHLNRWDAVIVPTPQQAQDMAARFGTA CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCC TPIFTIRVAFVKAADVAANRLPFSQREQHLVVHVARLAPEKQQASSIRAFAQVVKAIPDA CCEEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC KLELWGYANGDMAPKLHALVEKLHLADHVFFKGYTRDIAAVYNRAQLGLLPSSAEGFPLT CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCCCCCCCCCCCCEE LIEAQAHGLPMIANDIHYGPADILANGKSGLLTQNGDIDGLANAIIGLLNDSTKLAQFSA EEECCCCCCCEEECCCCCCCHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHH AAYDNALRFTDTSTFVQWQKLMAFAAKKKTRLAAFEHVD HHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYYFLNDQMAYAKSGIEGAEIQRLQLFKANQTPAKIVTRQFALDLHDVLKDAGIDDTDFI CEEEECCCHHHHHCCCCCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH NLFDYFCDLLSTPWQQVTVADVCQPTAGVTRRREGRQVIFSRGSRVIRIVYLREKAGREQ HHHHHHHHHHCCCHHHEEHHHHCCCCCCCHHCCCCCHHHHHCCCCEEEEEEEECCCCCCH EVSNVQYFDVTGRTIKMSWWDTRGNHCLDQYFDQGGKIFQEHYLNRHGRTRLEKLHYLNH HHCCEEEEEECCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCC SQQEKFSWKLVDFHGVDYLFDGLHDLTRFFYDQLNQVDGGYNVFVCDRTTETGWGLLHMT CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEC TPALKVLHLHNNHVAGNEDVLHAKLNNFYASALTHLNRWDAVIVPTPQQAQDMAARFGTA CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCC TPIFTIRVAFVKAADVAANRLPFSQREQHLVVHVARLAPEKQQASSIRAFAQVVKAIPDA CCEEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC KLELWGYANGDMAPKLHALVEKLHLADHVFFKGYTRDIAAVYNRAQLGLLPSSAEGFPLT CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCCCCCCCCCCCCEE LIEAQAHGLPMIANDIHYGPADILANGKSGLLTQNGDIDGLANAIIGLLNDSTKLAQFSA EEECCCCCCCEEECCCCCCCHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHH AAYDNALRFTDTSTFVQWQKLMAFAAKKKTRLAAFEHVD HHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2507871; 9384377 [H]