Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494350

Identifier: 116494350

GI number: 116494350

Start: 801522

End: 802049

Strand: Direct

Name: 116494350

Synonym: LSEI_0806

Alternate gene names: NA

Gene position: 801522-802049 (Clockwise)

Preceding gene: 116494349

Following gene: 116494351

Centisome position: 27.68

GC content: 46.21

Gene sequence:

>528_bases
ATGGCTAAAAAAGGACATTTTTTGCTTGGATTTGTATTCGGTGCCGCTAGTGCCTTAGCCACCACTTATTTATTAACACC
ACAAACAAGCGATGAATTGAAGCGGCGTGTGAAGCATGCTTCTGAAGACTTGGCAGATCGGGCAGTTGATTATTTCGATT
ATGCCAAGGAAGCTAGCGCTGACTGGAAACAAAGTGCCACAGATTTTGTTGATGAATTGAAGCGTAAAGGCGACGATGCT
GATGGTTCTAAAGCATTGGCAAACTATGATGCTGCCACCGAGCAATTGCGTGATCAACTGAATACGGCAACAGATGTGGA
CTCATCAGCAGACTTTGATGACATTGTTCTTGACGGTAAAAGTGCTTTTGCGCAAGCTAAAGATGATGACGAGGGCAGTG
ACACTCGCACCGATGAAGTGCCAGAACCAGTAGAACCAGAAGCAGTTGCACCAGCGTCAACTGATACCGCACCGGCTAGC
AGTGTCGCACTTGATGAACCGCAAGCATCTGCGACAAATGATAAGTAA

Upstream 100 bases:

>100_bases
AGAACGGAGCCAAGGCGACCGTTGCGGCTCGTATGAGTGCCAAGGCGTTTTCAATGTTGACGAAGAAAAAACATAACGAT
CAATAGCAGGGGGAAGAATC

Downstream 100 bases:

>100_bases
CAGACATGCATCACTTAGTCACAATTGATGCAAAAAAGGCGACAAACGGATTGTTCCTATGATTGGAGCAAGACGTTTGT
CGCTTTTCGCATCAGTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAKKGHFLLGFVFGAASALATTYLLTPQTSDELKRRVKHASEDLADRAVDYFDYAKEASADWKQSATDFVDELKRKGDDA
DGSKALANYDAATEQLRDQLNTATDVDSSADFDDIVLDGKSAFAQAKDDDEGSDTRTDEVPEPVEPEAVAPASTDTAPAS
SVALDEPQASATNDK

Sequences:

>Translated_175_residues
MAKKGHFLLGFVFGAASALATTYLLTPQTSDELKRRVKHASEDLADRAVDYFDYAKEASADWKQSATDFVDELKRKGDDA
DGSKALANYDAATEQLRDQLNTATDVDSSADFDDIVLDGKSAFAQAKDDDEGSDTRTDEVPEPVEPEAVAPASTDTAPAS
SVALDEPQASATNDK
>Mature_174_residues
AKKGHFLLGFVFGAASALATTYLLTPQTSDELKRRVKHASEDLADRAVDYFDYAKEASADWKQSATDFVDELKRKGDDAD
GSKALANYDAATEQLRDQLNTATDVDSSADFDDIVLDGKSAFAQAKDDDEGSDTRTDEVPEPVEPEAVAPASTDTAPASS
VALDEPQASATNDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18727; Mature: 18596

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKGHFLLGFVFGAASALATTYLLTPQTSDELKRRVKHASEDLADRAVDYFDYAKEASA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DWKQSATDFVDELKRKGDDADGSKALANYDAATEQLRDQLNTATDVDSSADFDDIVLDGK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCH
SAFAQAKDDDEGSDTRTDEVPEPVEPEAVAPASTDTAPASSVALDEPQASATNDK
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKKGHFLLGFVFGAASALATTYLLTPQTSDELKRRVKHASEDLADRAVDYFDYAKEASA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DWKQSATDFVDELKRKGDDADGSKALANYDAATEQLRDQLNTATDVDSSADFDDIVLDGK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCH
SAFAQAKDDDEGSDTRTDEVPEPVEPEAVAPASTDTAPASSVALDEPQASATNDK
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA