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The map label for this gene is 116494349

Identifier: 116494349

GI number: 116494349

Start: 801079

End: 801507

Strand: Direct

Name: 116494349

Synonym: LSEI_0805

Alternate gene names: NA

Gene position: 801079-801507 (Clockwise)

Preceding gene: 116494346

Following gene: 116494350

Centisome position: 27.67

GC content: 48.72

Gene sequence:

>429_bases
ATGTCAGGTGGAGAGATTGCTTGGATTATCGCGGCTGTTGCGTTTCTGATTATTGCACTTGCAATTGCGATTATTGCGGT
TCGTGTTTCTGGTGTGACGAAAGAAGTTAAGGGCACGGTTGCCGAGACGAATAAGACGTTGAACACGATCAACGGAGAGC
TTGGCATTTTGACGAAGGAAGTTGAAGGTCTTTTGGCTAAGAGCAACACCCTGCTTCAGGACGTGAACGGTAAGGTGGCG
GCAATTGACCCCGTCTTTACTGCGATCGGCGAACTTGGTGAGAGTGTCTCCGATTTGAATCAATCAACGCGCAATTTAAC
TGAGCGTGTTGCGCATGGTGCCAAGAACGGAGCCAAGGCGACCGTTGCGGCTCGTATGAGTGCCAAGGCGTTTTCAATGT
TGACGAAGAAAAAACATAACGATCAATAG

Upstream 100 bases:

>100_bases
TTTCTAAGCGCGCCGGTTTGCGGTCTTAATTTTTTTGCACCGTTCTTGTCACGATGTTATGATTGTTTTAATCAACTGGT
TTGAAATAGGAGGGTGTTGG

Downstream 100 bases:

>100_bases
CAGGGGGAAGAATCATGGCTAAAAAAGGACATTTTTTGCTTGGATTTGTATTCGGTGCCGCTAGTGCCTTAGCCACCACT
TATTTATTAACACCACAAAC

Product: methyl-accepting chemotaxis-like protein

Products: NA

Alternate protein names: Extracellular Protein; Tropomyosin; Methyl-Accepting Chemotaxis-Like Domain-Containing Protein; Methyl-Accepting Chemotaxis Protein; Ypothetical Protein SMU.; Tropomyosin-Related Protein; Exported Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSGGEIAWIIAAVAFLIIALAIAIIAVRVSGVTKEVKGTVAETNKTLNTINGELGILTKEVEGLLAKSNTLLQDVNGKVA
AIDPVFTAIGELGESVSDLNQSTRNLTERVAHGAKNGAKATVAARMSAKAFSMLTKKKHNDQ

Sequences:

>Translated_142_residues
MSGGEIAWIIAAVAFLIIALAIAIIAVRVSGVTKEVKGTVAETNKTLNTINGELGILTKEVEGLLAKSNTLLQDVNGKVA
AIDPVFTAIGELGESVSDLNQSTRNLTERVAHGAKNGAKATVAARMSAKAFSMLTKKKHNDQ
>Mature_141_residues
SGGEIAWIIAAVAFLIIALAIAIIAVRVSGVTKEVKGTVAETNKTLNTINGELGILTKEVEGLLAKSNTLLQDVNGKVAA
IDPVFTAIGELGESVSDLNQSTRNLTERVAHGAKNGAKATVAARMSAKAFSMLTKKKHNDQ

Specific function: Unknown

COG id: COG4768

COG function: function code R; Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14812; Mature: 14681

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGEIAWIIAAVAFLIIALAIAIIAVRVSGVTKEVKGTVAETNKTLNTINGELGILTKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VEGLLAKSNTLLQDVNGKVAAIDPVFTAIGELGESVSDLNQSTRNLTERVAHGAKNGAKA
HHHHHHHCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
TVAARMSAKAFSMLTKKKHNDQ
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGGEIAWIIAAVAFLIIALAIAIIAVRVSGVTKEVKGTVAETNKTLNTINGELGILTKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VEGLLAKSNTLLQDVNGKVAAIDPVFTAIGELGESVSDLNQSTRNLTERVAHGAKNGAKA
HHHHHHHCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
TVAARMSAKAFSMLTKKKHNDQ
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA