Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494068

Identifier: 116494068

GI number: 116494068

Start: 513270

End: 513692

Strand: Direct

Name: 116494068

Synonym: LSEI_0510

Alternate gene names: NA

Gene position: 513270-513692 (Clockwise)

Preceding gene: 116494067

Following gene: 116494069

Centisome position: 17.73

GC content: 42.79

Gene sequence:

>423_bases
ATGGATAAATTAAATTTGAATCTGAACGAACTGGCTGATGGGGCCATTAAAGAAAAGTTGACAAAGGCATTGGCCCAGGT
TGCCAATAACATTCTTGATCCTAATACTGATCAGAGCAAAGCACGAAAAGTTACCATTGCGCTTAACTTTAAGCCTGACG
ATAGCGGAGTCGTTAAGCTTACAACCGATGTCAAAACAACGCTAATACCAGACATCAGTGTCACCACCAATGTATTGCTT
GGACGTGGCGAGGACGGATATATGGAAATGAACGAGTTAAAGTCAGGTACACGAGGGCAGGAATACTTCGACCCAGATGA
TAGTACGCTAAAAGACGACAAAGGTATCCCAATTAAAGACGATAAGGTAACAGACGCACCGATTGATTTCCGAAAAATCA
AGAACGCCAAGGAGGCCAACTAA

Upstream 100 bases:

>100_bases
AGGACATTTGGAGTTATCAAGGCATTGGAGTCACGAGACGGAAAGTTATTTTGAGGAGAACAAGCTTGAATTTAGCAAAG
AAAAAGTAGGAGGAAATACT

Downstream 100 bases:

>100_bases
TATGACAACAGAAGCAGATGCACTTAAATTCACAGCAGAACAGGCAGTTACTGCAAATGGTAAACGAATTATCGAAACAA
AAAATCGTCAATTTTTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDKLNLNLNELADGAIKEKLTKALAQVANNILDPNTDQSKARKVTIALNFKPDDSGVVKLTTDVKTTLIPDISVTTNVLL
GRGEDGYMEMNELKSGTRGQEYFDPDDSTLKDDKGIPIKDDKVTDAPIDFRKIKNAKEAN

Sequences:

>Translated_140_residues
MDKLNLNLNELADGAIKEKLTKALAQVANNILDPNTDQSKARKVTIALNFKPDDSGVVKLTTDVKTTLIPDISVTTNVLL
GRGEDGYMEMNELKSGTRGQEYFDPDDSTLKDDKGIPIKDDKVTDAPIDFRKIKNAKEAN
>Mature_140_residues
MDKLNLNLNELADGAIKEKLTKALAQVANNILDPNTDQSKARKVTIALNFKPDDSGVVKLTTDVKTTLIPDISVTTNVLL
GRGEDGYMEMNELKSGTRGQEYFDPDDSTLKDDKGIPIKDDKVTDAPIDFRKIKNAKEAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15393; Mature: 15393

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLNLNLNELADGAIKEKLTKALAQVANNILDPNTDQSKARKVTIALNFKPDDSGVVKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEE
TTDVKTTLIPDISVTTNVLLGRGEDGYMEMNELKSGTRGQEYFDPDDSTLKDDKGIPIKD
ECCCEEEECCCCCCEEEEEEECCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DKVTDAPIDFRKIKNAKEAN
CCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MDKLNLNLNELADGAIKEKLTKALAQVANNILDPNTDQSKARKVTIALNFKPDDSGVVKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEE
TTDVKTTLIPDISVTTNVLLGRGEDGYMEMNELKSGTRGQEYFDPDDSTLKDDKGIPIKD
ECCCEEEECCCCCCEEEEEEECCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DKVTDAPIDFRKIKNAKEAN
CCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA