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The map label for this gene is 116494067

Identifier: 116494067

GI number: 116494067

Start: 512705

End: 513223

Strand: Direct

Name: 116494067

Synonym: LSEI_0509

Alternate gene names: NA

Gene position: 512705-513223 (Clockwise)

Preceding gene: 116494066

Following gene: 116494068

Centisome position: 17.71

GC content: 44.89

Gene sequence:

>519_bases
ATGAAAGAATACGTGATTATGGACACGGAGTTTAACTCAACCAGTAATCGAGCAATTCAAATATCAGCAGTCAGAATTCG
AGACGGTCTGCACATTGCAGATCAGTTCAACCGATTCATTCCATCACCAGATAAATTTGATCAGCTTCACATCATTAGGA
CAAGTAACATGCGATACAGCGACTATTTAGCTTTACCAAGCCTGCAGCAAACAGTGCGTGACTACGTGGCCTGGATGAGA
ACTACGATTGACATTGTGGGGTGGTCGATTGAAGGCGATGCGGGCCGCATCAGAGAAACATTTAAAAAGGGGTCACATGG
CATCCCCAAGAACTGGAAGTTTATCGACATCGCAGACATCGTTGAAAAGCGGTATAGCTTTAATGCTACGCCTCCGCTGC
AAGGACTGGCGAATGTTCTAGGCATACCAGTAAACCGTACTCACAACGCGCTAGATGACTGTTTAAGGACATTTGGAGTT
ATCAAGGCATTGGAGTCACGAGACGGAAAGTTATTTTGA

Upstream 100 bases:

>100_bases
GGTACGGCGAGCGAACTATGTCCCGTATGGCCAAGCACGGCCAAGGAAATAGCTTTGGCGTTAAAGGAATCCTAGATCAG
CGAAAAGAGGCGTTGCCTTG

Downstream 100 bases:

>100_bases
GGAGAACAAGCTTGAATTTAGCAAAGAAAAAGTAGGAGGAAATACTATGGATAAATTAAATTTGAATCTGAACGAACTGG
CTGATGGGGCCATTAAAGAA

Product: DNA polymerase III, epsilon subunit related 3'-5' exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKEYVIMDTEFNSTSNRAIQISAVRIRDGLHIADQFNRFIPSPDKFDQLHIIRTSNMRYSDYLALPSLQQTVRDYVAWMR
TTIDIVGWSIEGDAGRIRETFKKGSHGIPKNWKFIDIADIVEKRYSFNATPPLQGLANVLGIPVNRTHNALDDCLRTFGV
IKALESRDGKLF

Sequences:

>Translated_172_residues
MKEYVIMDTEFNSTSNRAIQISAVRIRDGLHIADQFNRFIPSPDKFDQLHIIRTSNMRYSDYLALPSLQQTVRDYVAWMR
TTIDIVGWSIEGDAGRIRETFKKGSHGIPKNWKFIDIADIVEKRYSFNATPPLQGLANVLGIPVNRTHNALDDCLRTFGV
IKALESRDGKLF
>Mature_172_residues
MKEYVIMDTEFNSTSNRAIQISAVRIRDGLHIADQFNRFIPSPDKFDQLHIIRTSNMRYSDYLALPSLQQTVRDYVAWMR
TTIDIVGWSIEGDAGRIRETFKKGSHGIPKNWKFIDIADIVEKRYSFNATPPLQGLANVLGIPVNRTHNALDDCLRTFGV
IKALESRDGKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19704; Mature: 19704

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEYVIMDTEFNSTSNRAIQISAVRIRDGLHIADQFNRFIPSPDKFDQLHIIRTSNMRYS
CCCEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCH
DYLALPSLQQTVRDYVAWMRTTIDIVGWSIEGDAGRIRETFKKGSHGIPKNWKFIDIADI
HHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCCCCCEEEHHHH
VEKRYSFNATPPLQGLANVLGIPVNRTHNALDDCLRTFGVIKALESRDGKLF
HHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKEYVIMDTEFNSTSNRAIQISAVRIRDGLHIADQFNRFIPSPDKFDQLHIIRTSNMRYS
CCCEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCH
DYLALPSLQQTVRDYVAWMRTTIDIVGWSIEGDAGRIRETFKKGSHGIPKNWKFIDIADI
HHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCCCCCEEEHHHH
VEKRYSFNATPPLQGLANVLGIPVNRTHNALDDCLRTFGVIKALESRDGKLF
HHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA