Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494055

Identifier: 116494055

GI number: 116494055

Start: 507157

End: 507915

Strand: Direct

Name: 116494055

Synonym: LSEI_0497

Alternate gene names: NA

Gene position: 507157-507915 (Clockwise)

Preceding gene: 116494053

Following gene: 116494056

Centisome position: 17.52

GC content: 44.53

Gene sequence:

>759_bases
ATGAAAGAAGGAAACGCATTGAATGAACCACAACCAATTGAACAAAACGGCCAGCGTGTACTGACCACCGAACAACTTGC
AGAATTGTACGGAACGACTGTTGGAGTCGTTCAAATGAACTTTAAACGAAACTCGAATAAGTTCATTGAAGGAAAGCACT
TCTTCAAGCTGGAAGGGGAGCAACTTCGGGCATTCAAGAACGAACCGACAAATTGTGGGTTCGTTGGGAAAAATGCAAGT
GCTCTATATCTCTGGACTCGCCGCGGCGCCGCACGTCACTCAAAAATGCTTGGTACAGATCAGGCTTGGGATATGTTCGA
CAGTCTGGAGGAGAACTACTTTAATCCGAAAACACGGCTTCCACAGACGCCAGAAGAAAAGCTTGCTTTAACCATGGAAG
TTGCTACTCGAACTGTAAAACGGATTGAAAAGCTTGATGGTCGTGTAACTGATCTGGAAGAGAAGGCTTTGCTGGCACCA
GGTGAATATAACTACATCAGCAAACAAGTCAATCGAGCTGTTGCAAATTATCTGGACGTACATCACTGCAAACTCAACGC
AAAACAGCGCAGCCTCTTTTATCGCGATATTAACCACGGACTAAATGACTACATCGGAATCAAGACACGTACACAGTTAC
GTAAGAAAGACTTCGATAAGGCTGATGACTTTATCCAGAATTGGACGCCATCAACAGCAACTCTCATGAAAGCACGCGAG
ATTTCATTATTGGAGGACCAACAACAGGAGGCTATCTAA

Upstream 100 bases:

>100_bases
ATATATTTTCAACAGCTACGGCATCAATTGGTTTGGACATTACATTCCCTCCTTATGAACTATTATCCCACTGACGGAGG
GCAGCAAACTATGAAAATTC

Downstream 100 bases:

>100_bases
ATGAATGAACGCCCAAAGGAAAAGTTAACCAATGTCGTTAAAGTACAGGACAAAGATGTTGAAGACCAAGTAACTGGAAT
GGTCATTGATCTTCTCAAAC

Product: Phage anti-repressor protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGEQLRAFKNEPTNCGFVGKNAS
ALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAP
GEYNYISKQVNRAVANYLDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE
ISLLEDQQQEAI

Sequences:

>Translated_252_residues
MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGEQLRAFKNEPTNCGFVGKNAS
ALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAP
GEYNYISKQVNRAVANYLDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE
ISLLEDQQQEAI
>Mature_252_residues
MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGEQLRAFKNEPTNCGFVGKNAS
ALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAP
GEYNYISKQVNRAVANYLDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE
ISLLEDQQQEAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29048; Mature: 29048

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGE
CCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCEEEEEEEEEECCCCCEECCCEEEEECHH
QLRAFKNEPTNCGFVGKNASALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRL
HHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAPGEYNYISKQVNRAVANYLDV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHH
HHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE
HHHCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH
ISLLEDQQQEAI
HHHHHHHHHHCC
>Mature Secondary Structure
MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGE
CCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCEEEEEEEEEECCCCCEECCCEEEEECHH
QLRAFKNEPTNCGFVGKNASALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRL
HHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAPGEYNYISKQVNRAVANYLDV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHH
HHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE
HHHCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH
ISLLEDQQQEAI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA