| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494055
Identifier: 116494055
GI number: 116494055
Start: 507157
End: 507915
Strand: Direct
Name: 116494055
Synonym: LSEI_0497
Alternate gene names: NA
Gene position: 507157-507915 (Clockwise)
Preceding gene: 116494053
Following gene: 116494056
Centisome position: 17.52
GC content: 44.53
Gene sequence:
>759_bases ATGAAAGAAGGAAACGCATTGAATGAACCACAACCAATTGAACAAAACGGCCAGCGTGTACTGACCACCGAACAACTTGC AGAATTGTACGGAACGACTGTTGGAGTCGTTCAAATGAACTTTAAACGAAACTCGAATAAGTTCATTGAAGGAAAGCACT TCTTCAAGCTGGAAGGGGAGCAACTTCGGGCATTCAAGAACGAACCGACAAATTGTGGGTTCGTTGGGAAAAATGCAAGT GCTCTATATCTCTGGACTCGCCGCGGCGCCGCACGTCACTCAAAAATGCTTGGTACAGATCAGGCTTGGGATATGTTCGA CAGTCTGGAGGAGAACTACTTTAATCCGAAAACACGGCTTCCACAGACGCCAGAAGAAAAGCTTGCTTTAACCATGGAAG TTGCTACTCGAACTGTAAAACGGATTGAAAAGCTTGATGGTCGTGTAACTGATCTGGAAGAGAAGGCTTTGCTGGCACCA GGTGAATATAACTACATCAGCAAACAAGTCAATCGAGCTGTTGCAAATTATCTGGACGTACATCACTGCAAACTCAACGC AAAACAGCGCAGCCTCTTTTATCGCGATATTAACCACGGACTAAATGACTACATCGGAATCAAGACACGTACACAGTTAC GTAAGAAAGACTTCGATAAGGCTGATGACTTTATCCAGAATTGGACGCCATCAACAGCAACTCTCATGAAAGCACGCGAG ATTTCATTATTGGAGGACCAACAACAGGAGGCTATCTAA
Upstream 100 bases:
>100_bases ATATATTTTCAACAGCTACGGCATCAATTGGTTTGGACATTACATTCCCTCCTTATGAACTATTATCCCACTGACGGAGG GCAGCAAACTATGAAAATTC
Downstream 100 bases:
>100_bases ATGAATGAACGCCCAAAGGAAAAGTTAACCAATGTCGTTAAAGTACAGGACAAAGATGTTGAAGACCAAGTAACTGGAAT GGTCATTGATCTTCTCAAAC
Product: Phage anti-repressor protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGEQLRAFKNEPTNCGFVGKNAS ALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAP GEYNYISKQVNRAVANYLDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE ISLLEDQQQEAI
Sequences:
>Translated_252_residues MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGEQLRAFKNEPTNCGFVGKNAS ALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAP GEYNYISKQVNRAVANYLDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE ISLLEDQQQEAI >Mature_252_residues MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGEQLRAFKNEPTNCGFVGKNAS ALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAP GEYNYISKQVNRAVANYLDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE ISLLEDQQQEAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29048; Mature: 29048
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGE CCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCEEEEEEEEEECCCCCEECCCEEEEECHH QLRAFKNEPTNCGFVGKNASALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRL HHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC PQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAPGEYNYISKQVNRAVANYLDV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHH HHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE HHHCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH ISLLEDQQQEAI HHHHHHHHHHCC >Mature Secondary Structure MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGE CCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCEEEEEEEEEECCCCCEECCCEEEEECHH QLRAFKNEPTNCGFVGKNASALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRL HHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC PQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAPGEYNYISKQVNRAVANYLDV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHH HHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKARE HHHCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH ISLLEDQQQEAI HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA