Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494053

Identifier: 116494053

GI number: 116494053

Start: 506092

End: 506292

Strand: Direct

Name: 116494053

Synonym: LSEI_0495

Alternate gene names: NA

Gene position: 506092-506292 (Clockwise)

Preceding gene: 116494052

Following gene: 116494055

Centisome position: 17.48

GC content: 43.78

Gene sequence:

>201_bases
ATGATCAAGCCGATTGATGCAATTCGCAATGAGCTTCCAGTGGTTACGTCCAAAACGTTAGATCTATTTGAGTCTGCTGT
TAGTCAAGAACTACAAAAAAGAAACCCAAAAGCCACATTCCAAGTTAGCATCCTTGGGATGGCGGTATTGGGCCTTCTGG
TGGCAACAAGGCTAGAGGAAGTCTCTGACATTAACAACTGA

Upstream 100 bases:

>100_bases
AGCGAGCTATTGAATACGTCAAATATAAGCAGTCACAGCAAAAGAAGATGACGGTATGAACGGGCTAATCAAACTTCATG
TGGAATAGGGAGGAAGATAA

Downstream 100 bases:

>100_bases
ATCAAGCATTGTCTGTGCTGCGGACATGATAACAAACGCTTGGACAGCATCATCGACACTGGAGGGATCGTAAATCTTAG
GGGTGTGGGCTTTGGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MIKPIDAIRNELPVVTSKTLDLFESAVSQELQKRNPKATFQVSILGMAVLGLLVATRLEEVSDINN

Sequences:

>Translated_66_residues
MIKPIDAIRNELPVVTSKTLDLFESAVSQELQKRNPKATFQVSILGMAVLGLLVATRLEEVSDINN
>Mature_66_residues
MIKPIDAIRNELPVVTSKTLDLFESAVSQELQKRNPKATFQVSILGMAVLGLLVATRLEEVSDINN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7267; Mature: 7267

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPIDAIRNELPVVTSKTLDLFESAVSQELQKRNPKATFQVSILGMAVLGLLVATRLEE
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VSDINN
HHCCCC
>Mature Secondary Structure
MIKPIDAIRNELPVVTSKTLDLFESAVSQELQKRNPKATFQVSILGMAVLGLLVATRLEE
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VSDINN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA