| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493969
Identifier: 116493969
GI number: 116493969
Start: 407763
End: 408179
Strand: Direct
Name: 116493969
Synonym: LSEI_0405
Alternate gene names: NA
Gene position: 407763-408179 (Clockwise)
Preceding gene: 116493968
Following gene: 116493970
Centisome position: 14.08
GC content: 47.48
Gene sequence:
>417_bases ATGAAACGCACAATCGTATTGGCGTCACATCATCGGCTCGCTGAAGGGTTGAAAGACACATTGGATTTCATTAGTGGCGG CGGTCAAGACATCGTGACGCTGGCAGCGTATTTGGACAATCAGCCGGTTGAAAAGCAAGTCGATGAGGTTATGACTGCTT TCCCAGCTGATCGTGATGTTGTGGTACTGACGGATATGACGGCAGGGAGCGTTAATCAAAAGTTCTTCAAATATCGCACA CGTCCGCATACACATATCATCAGCGGCATGAATCTGCCACTTGCACTTGGCGTTGCGATGGAACCGGCTGATCAGTATAT TAGCGATGCTCGAATTGATGCGCTGATTCAAGAGGCCAAAGATGCAATCGTCAATGTCAACGAGATTCAAGTTGAGGAAG ATGACGATGATGAATGA
Upstream 100 bases:
>100_bases TGAATGATTAGGCCTGAAATGACCGTCCTTTGGTCATTGCGGATAAGGTCCTTAGGTGCAGGTTTCTGGTCTGGTAAACG TGGTTAGAGGAGGAAGATTC
Downstream 100 bases:
>100_bases AATACCATGGTGGAAAAAGAGCGTTGTCTATCAGGTTTATCCGAAAAGCTTCAATGATAGTAACGGTGATGGCGTCGGGG ACTTAAATGGTATCAGTGAA
Product: phosphotransferase system, mannose/fructose-specific component IIA
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System Fructocific IIA Component; PTS System IIA Component; PTS System N-Acetylgalactosamine-Specific IIA Component; PTS System Mannose/Fructose Family IIA Component; PTS Transport System IIA Component; PTS Family Mannose/Fructose/Sorbose Porter Component IIA; PTS System Sorbocific IIA Component; PTS System Transporter Subunit IIA; PTS System Mannose-Specific IIA Component; PTS Permease; Phosphotransferase System
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKRTIVLASHHRLAEGLKDTLDFISGGGQDIVTLAAYLDNQPVEKQVDEVMTAFPADRDVVVLTDMTAGSVNQKFFKYRT RPHTHIISGMNLPLALGVAMEPADQYISDARIDALIQEAKDAIVNVNEIQVEEDDDDE
Sequences:
>Translated_138_residues MKRTIVLASHHRLAEGLKDTLDFISGGGQDIVTLAAYLDNQPVEKQVDEVMTAFPADRDVVVLTDMTAGSVNQKFFKYRT RPHTHIISGMNLPLALGVAMEPADQYISDARIDALIQEAKDAIVNVNEIQVEEDDDDE >Mature_138_residues MKRTIVLASHHRLAEGLKDTLDFISGGGQDIVTLAAYLDNQPVEKQVDEVMTAFPADRDVVVLTDMTAGSVNQKFFKYRT RPHTHIISGMNLPLALGVAMEPADQYISDARIDALIQEAKDAIVNVNEIQVEEDDDDE
Specific function: Unknown
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 15267; Mature: 15267
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTIVLASHHRLAEGLKDTLDFISGGGQDIVTLAAYLDNQPVEKQVDEVMTAFPADRDV CCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCE VVLTDMTAGSVNQKFFKYRTRPHTHIISGMNLPLALGVAMEPADQYISDARIDALIQEAK EEEECCCCCCHHHHHHHHCCCCCCEEECCCCCCEEECEEECCHHHHHHHHHHHHHHHHHH DAIVNVNEIQVEEDDDDE HHHCCCHHEEECCCCCCC >Mature Secondary Structure MKRTIVLASHHRLAEGLKDTLDFISGGGQDIVTLAAYLDNQPVEKQVDEVMTAFPADRDV CCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCE VVLTDMTAGSVNQKFFKYRTRPHTHIISGMNLPLALGVAMEPADQYISDARIDALIQEAK EEEECCCCCCHHHHHHHHCCCCCCEEECCCCCCEEECEEECCHHHHHHHHHHHHHHHHHH DAIVNVNEIQVEEDDDDE HHHCCCHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA