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The map label for this gene is yhfW [H]

Identifier: 116493949

GI number: 116493949

Start: 382785

End: 384014

Strand: Direct

Name: yhfW [H]

Synonym: LSEI_0383

Alternate gene names: 116493949

Gene position: 382785-384014 (Clockwise)

Preceding gene: 116493948

Following gene: 116493950

Centisome position: 13.22

GC content: 44.07

Gene sequence:

>1230_bases
ATGGGCAAATACGGTGTCATTGTTTTAGACAGTTTTGGTGTTGGTGCCATGGATGATGTTCCTAAAGTACGCCCGGATGA
CATCGGGGCAAACACAGCTTTAAATATCATTAAGGCAGTACCACAGATTAAAATTCCTAATCTGGAAAAGCTAGGATTGA
TGAACGCTATTGGTCAAGAGCGGGGCGATCACAAATTTTCGCCGACAGCAAATTGGGGGACCTCCTTGCTGATGCACCAT
GGCGCTGATTCTTATCTTGCGCATCAAGAAATCATGGGTACAAAGCCTAAGATGCCACTGCTTCAGCCGTTCAATGAAGT
GATCGATACAGTTGAGGCACAGGTTAAGAAAGATGGATTCAATGTCGAACGTTACGGTGATCCCGGCTACCAATTATTAC
TCGTTAATCATTGTGCGACAATTGGTGACAATCTCGAAGCAGATCCTGGGCAGGTCTATAACGTAACTGCAGCACTTGAT
GAAATGCCATTTGATGAAATTACGCGTTTAGGAGAATCAGTTCGCAGCGTGGTCAAAGTCTCGCGGGTCATTGCTTTTGG
TGGACGAGGCGTTGATTTGAAGAACATTTTGGCAGCTCGGAAAATTGAACACGAGAAGTATGTCGGTGTTTCAGCGCCGG
AATCCGGCGTCTACAACACAGATTATCATGTCATTCACTTAGGTTATGGTATTAATCCTAAGGTGCAGTTGCCGTCAATT
TTGCACGCAAATGGTATTGATGTTGCCTTAGTTGGCAAGACGGCAGATATCATTAATGTTGATACACCACGGAAGTTCCC
AGGTGTTGATACGGACTATCTTTTTGATAAGTTTGTTGAACAGTCGAAGGATATGAAAGATGGCCTGCTGTTTATGAACA
TTCAAGAAACTGATTTAGCAGGTCACGCCGAAGATCCTGTTCGATACGCTGAAGTACTTGAAACAGCAGACAAGCGGTTA
GCCGATGTCTTACCACTTTATACAGGCGACGATATTTTAATTGTCATGGCTGACCATGGCGATGATCCAACGATCGGATT
TAGTCTGCACACGCGGGAACGGACACCTTTGTTGATTTACAAGGAAGGTACTCACAATAAGTATGTAGGCGAACGTTCAA
CACTTTCTGATGTCGGAGCTACAGGTTCAGATTTCTTCAATGTACCATCCCCGGAGAATGGCAAAAGCTTTTTGCATAGA
ATTATCGATGGAACAGATTTAGACGCATAA

Upstream 100 bases:

>100_bases
GTTGCTTTAGTTCGTGGTTTACACACAGCCGACAAAACACCTGAATTAGTTGGTTTGTACGATAGCCAAGGAAAAAAATT
ACCAGAAGGGATGCAATAGC

Downstream 100 bases:

>100_bases
AGCTACAAGGACTGGTAGTGACAGATGATGACTGTGAGAGGTCGTCATCTGTCACTATTTTTGTATGATCATACTAATGT
TTTTTATGTGCTGATGTTGT

Product: putative mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MGKYGVIVLDSFGVGAMDDVPKVRPDDIGANTALNIIKAVPQIKIPNLEKLGLMNAIGQERGDHKFSPTANWGTSLLMHH
GADSYLAHQEIMGTKPKMPLLQPFNEVIDTVEAQVKKDGFNVERYGDPGYQLLLVNHCATIGDNLEADPGQVYNVTAALD
EMPFDEITRLGESVRSVVKVSRVIAFGGRGVDLKNILAARKIEHEKYVGVSAPESGVYNTDYHVIHLGYGINPKVQLPSI
LHANGIDVALVGKTADIINVDTPRKFPGVDTDYLFDKFVEQSKDMKDGLLFMNIQETDLAGHAEDPVRYAEVLETADKRL
ADVLPLYTGDDILIVMADHGDDPTIGFSLHTRERTPLLIYKEGTHNKYVGERSTLSDVGATGSDFFNVPSPENGKSFLHR
IIDGTDLDA

Sequences:

>Translated_409_residues
MGKYGVIVLDSFGVGAMDDVPKVRPDDIGANTALNIIKAVPQIKIPNLEKLGLMNAIGQERGDHKFSPTANWGTSLLMHH
GADSYLAHQEIMGTKPKMPLLQPFNEVIDTVEAQVKKDGFNVERYGDPGYQLLLVNHCATIGDNLEADPGQVYNVTAALD
EMPFDEITRLGESVRSVVKVSRVIAFGGRGVDLKNILAARKIEHEKYVGVSAPESGVYNTDYHVIHLGYGINPKVQLPSI
LHANGIDVALVGKTADIINVDTPRKFPGVDTDYLFDKFVEQSKDMKDGLLFMNIQETDLAGHAEDPVRYAEVLETADKRL
ADVLPLYTGDDILIVMADHGDDPTIGFSLHTRERTPLLIYKEGTHNKYVGERSTLSDVGATGSDFFNVPSPENGKSFLHR
IIDGTDLDA
>Mature_408_residues
GKYGVIVLDSFGVGAMDDVPKVRPDDIGANTALNIIKAVPQIKIPNLEKLGLMNAIGQERGDHKFSPTANWGTSLLMHHG
ADSYLAHQEIMGTKPKMPLLQPFNEVIDTVEAQVKKDGFNVERYGDPGYQLLLVNHCATIGDNLEADPGQVYNVTAALDE
MPFDEITRLGESVRSVVKVSRVIAFGGRGVDLKNILAARKIEHEKYVGVSAPESGVYNTDYHVIHLGYGINPKVQLPSIL
HANGIDVALVGKTADIINVDTPRKFPGVDTDYLFDKFVEQSKDMKDGLLFMNIQETDLAGHAEDPVRYAEVLETADKRLA
DVLPLYTGDDILIVMADHGDDPTIGFSLHTRERTPLLIYKEGTHNKYVGERSTLSDVGATGSDFFNVPSPENGKSFLHRI
IDGTDLDA

Specific function: Unknown

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family [H]

Homologues:

Organism=Escherichia coli, GI1789781, Length=402, Percent_Identity=47.7611940298507, Blast_Score=381, Evalue=1e-107,
Organism=Escherichia coli, GI1790843, Length=443, Percent_Identity=27.313769751693, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme [H]

EC number: NA

Molecular weight: Translated: 44777; Mature: 44646

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKYGVIVLDSFGVGAMDDVPKVRPDDIGANTALNIIKAVPQIKIPNLEKLGLMNAIGQE
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
RGDHKFSPTANWGTSLLMHHGADSYLAHQEIMGTKPKMPLLQPFNEVIDTVEAQVKKDGF
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
NVERYGDPGYQLLLVNHCATIGDNLEADPGQVYNVTAALDEMPFDEITRLGESVRSVVKV
CEEEECCCCEEEEEEEHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHH
SRVIAFGGRGVDLKNILAARKIEHEKYVGVSAPESGVYNTDYHVIHLGYGINPKVQLPSI
HHHHHCCCCCCCHHHHHHHHHHCHHHEECCCCCCCCCCCCCEEEEEEECCCCCCEECCCE
LHANGIDVALVGKTADIINVDTPRKFPGVDTDYLFDKFVEQSKDMKDGLLFMNIQETDLA
EECCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
GHAEDPVRYAEVLETADKRLADVLPLYTGDDILIVMADHGDDPTIGFSLHTRERTPLLIY
CCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCCCEEEEEEECCCCCCEEEE
KEGTHNKYVGERSTLSDVGATGSDFFNVPSPENGKSFLHRIIDGTDLDA
ECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GKYGVIVLDSFGVGAMDDVPKVRPDDIGANTALNIIKAVPQIKIPNLEKLGLMNAIGQE
CCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
RGDHKFSPTANWGTSLLMHHGADSYLAHQEIMGTKPKMPLLQPFNEVIDTVEAQVKKDGF
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
NVERYGDPGYQLLLVNHCATIGDNLEADPGQVYNVTAALDEMPFDEITRLGESVRSVVKV
CEEEECCCCEEEEEEEHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHH
SRVIAFGGRGVDLKNILAARKIEHEKYVGVSAPESGVYNTDYHVIHLGYGINPKVQLPSI
HHHHHCCCCCCCHHHHHHHHHHCHHHEECCCCCCCCCCCCCEEEEEEECCCCCCEECCCE
LHANGIDVALVGKTADIINVDTPRKFPGVDTDYLFDKFVEQSKDMKDGLLFMNIQETDLA
EECCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
GHAEDPVRYAEVLETADKRLADVLPLYTGDDILIVMADHGDDPTIGFSLHTRERTPLLIY
CCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCCCEEEEEEECCCCCCEEEE
KEGTHNKYVGERSTLSDVGATGSDFFNVPSPENGKSFLHRIIDGTDLDA
ECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]