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The map label for this gene is 116493914

Identifier: 116493914

GI number: 116493914

Start: 346169

End: 346789

Strand: Direct

Name: 116493914

Synonym: LSEI_0347

Alternate gene names: NA

Gene position: 346169-346789 (Clockwise)

Preceding gene: 116493911

Following gene: 116493916

Centisome position: 11.96

GC content: 45.25

Gene sequence:

>621_bases
TTGCGTTACAACATCAGTTATCGAGATCTAGTTGAAATGATGCGCGACCGTGGTATTTTCGTGCATCACACAACCCTCAT
GCGTTGGGTACAACATTACTCACCGATTATGCGGGCTCTATGGCGTAAGCGCCATCGGCGCACTTTCAAAAGTTGGCGTA
TGGATGAGACCTATATCAAGATCAAAGGTCAATGGAATTACCTCTACCGTGCCATTGATGATCAAGGTCTTACGCTTGAT
TTTCAACTGCGCAAGAAGCGTGACTTTAACTCGGCCTATCATTTTCTCAAACGCCTTTTAAAGACCTATGGTCTTCCACA
TCGATTAGTGACTGATCAGTACGGAGCGACCCTAAAGGCAATTAAAAAGCTTACTAGGGAAGGCTATCTGCACAAAGGTG
TGCATCAGTGCTCCAAATATCGCAATAATCTGATTGAGCAAGATCACCGTTTTATTAAGCGGCAACAAGTTCGTTCCGCA
AGTTATCAGAGCACTCGGGCAGCAGCTAGGACATTATACGGCATTGAAACCATGCATGCGATACACAAAGAAAGCCGAAA
GAAGCTAGGCCTCTTCGGCTTTTCAGCGTATCAAGAAGTCGACCAATTGTTAGCGGCATAG

Upstream 100 bases:

>100_bases
CTGTATCATGAATTGAAACTGGAGGTTTTCAGATGACTGATCATTTTAAAGGACGGCAATTCAATCAATCAGTGATATTA
CTTTTGCCGTAGGCTACTAC

Downstream 100 bases:

>100_bases
GCTACAACCACTAAACACAGTCACTTTGATCTACGCTTAATTTCAACTTTGCGCCAGAACCCGAGAAATCAAGCTTGAGT
GGGGTGACTGTCTGCGCACG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRYNISYRDLVEMMRDRGIFVHHTTLMRWVQHYSPIMRALWRKRHRRTFKSWRMDETYIKIKGQWNYLYRAIDDQGLTLD
FQLRKKRDFNSAYHFLKRLLKTYGLPHRLVTDQYGATLKAIKKLTREGYLHKGVHQCSKYRNNLIEQDHRFIKRQQVRSA
SYQSTRAAARTLYGIETMHAIHKESRKKLGLFGFSAYQEVDQLLAA

Sequences:

>Translated_206_residues
MRYNISYRDLVEMMRDRGIFVHHTTLMRWVQHYSPIMRALWRKRHRRTFKSWRMDETYIKIKGQWNYLYRAIDDQGLTLD
FQLRKKRDFNSAYHFLKRLLKTYGLPHRLVTDQYGATLKAIKKLTREGYLHKGVHQCSKYRNNLIEQDHRFIKRQQVRSA
SYQSTRAAARTLYGIETMHAIHKESRKKLGLFGFSAYQEVDQLLAA
>Mature_206_residues
MRYNISYRDLVEMMRDRGIFVHHTTLMRWVQHYSPIMRALWRKRHRRTFKSWRMDETYIKIKGQWNYLYRAIDDQGLTLD
FQLRKKRDFNSAYHFLKRLLKTYGLPHRLVTDQYGATLKAIKKLTREGYLHKGVHQCSKYRNNLIEQDHRFIKRQQVRSA
SYQSTRAAARTLYGIETMHAIHKESRKKLGLFGFSAYQEVDQLLAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 24933; Mature: 24933

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYNISYRDLVEMMRDRGIFVHHTTLMRWVQHYSPIMRALWRKRHRRTFKSWRMDETYIK
CCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
IKGQWNYLYRAIDDQGLTLDFQLRKKRDFNSAYHFLKRLLKTYGLPHRLVTDQYGATLKA
EECCHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IKKLTREGYLHKGVHQCSKYRNNLIEQDHRFIKRQQVRSASYQSTRAAARTLYGIETMHA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHKESRKKLGLFGFSAYQEVDQLLAA
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRYNISYRDLVEMMRDRGIFVHHTTLMRWVQHYSPIMRALWRKRHRRTFKSWRMDETYIK
CCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
IKGQWNYLYRAIDDQGLTLDFQLRKKRDFNSAYHFLKRLLKTYGLPHRLVTDQYGATLKA
EECCHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IKKLTREGYLHKGVHQCSKYRNNLIEQDHRFIKRQQVRSASYQSTRAAARTLYGIETMHA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHKESRKKLGLFGFSAYQEVDQLLAA
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]