Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493899

Identifier: 116493899

GI number: 116493899

Start: 331556

End: 332425

Strand: Direct

Name: 116493899

Synonym: LSEI_0331

Alternate gene names: NA

Gene position: 331556-332425 (Clockwise)

Preceding gene: 116493898

Following gene: 116493900

Centisome position: 11.45

GC content: 41.61

Gene sequence:

>870_bases
ATGATTAAGATCTTATTGGGATTAATCGTACTAATTAATTTAGGCTTTGTATTTTACTTTATCCGTGACTTGCTCCGGCA
TCGTTCAGATGTTATGTCGGAACCTGCAACGACATGGGCATTGCCATTTAGCTCATTTATTATCTTCTTACTTTCAACTT
TTGGCATTTCTGATTTTGCTATCAGCACGGCACTTTACCCTAAGGCTAAATGGGTTTCAATTAAGAAACTGCCAGGCACC
TTAAACACGCAATGTGTTGTCCCCGTTGCTGCAATGGCACTTTCTTACATCACCGCCATTACTGTCGATATTAAAACGCT
AGCCGTATGTATCATCGCGGCAGTCATTGGTGCTTACATCGGACCTAGGTTTGTTGTTAAACTGCCAGCTAACACAATTA
AGAAGTTTGTGACAGCAGGTCTGATTATTGCCGCGTTAATGATTTTAGCGGGTAAGTTCAATTGGATTCCTGCTAACGGA
ACAGCAACGAGCTTATCTGGCTGGAAATTAATGCTAACTGCAATCCTGCTGTTCATTTATGGTGCTCTTAACAACATCGG
TATTGGTTCCTATGCTTTGACGATGGCCACGGTTTATGCGATGGGGCTCAATCCATCAGCTGCTTTTCCAATCATGATGG
GAGCCGCAACATTCTCAGTTTCAACGAGTTCGATTCAATTCGTTAAGTTGGCAGATTATAGTCGAAAAATCACATTATTC
ACTTCAACTTTTGGTGTGCTGGGTGTCTTAGTTGCCGTCTTTTTCGTTAAAAGCTTAGATACTAGTATGTTACAGTGGCT
GGTTATCATTGTGCTACTTTATTCCGCAATCAGCATGGCATTGTCCTTGCGTCAAAAGGGAGAAGCATAG

Upstream 100 bases:

>100_bases
ACGCTGGAAACTTTAGATGCAGCAGCAAAGAAGGCGTTTGGTCCGGATCTCGAAGGCGTCAGAGATATTTATATGATGGA
TAGAAAAGGGAAGAATGCTC

Downstream 100 bases:

>100_bases
CATTGCTGTTTCAGGTTCAACAATTATAGGAGGATTATGATGCGCGTTTTAACGAAAAAAGATGTTCAAGCAGTTTACTC
AATGAAAGATGCAATCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Family Protein; Permease; Na+/Solute Symporter

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIKILLGLIVLINLGFVFYFIRDLLRHRSDVMSEPATTWALPFSSFIIFLLSTFGISDFAISTALYPKAKWVSIKKLPGT
LNTQCVVPVAAMALSYITAITVDIKTLAVCIIAAVIGAYIGPRFVVKLPANTIKKFVTAGLIIAALMILAGKFNWIPANG
TATSLSGWKLMLTAILLFIYGALNNIGIGSYALTMATVYAMGLNPSAAFPIMMGAATFSVSTSSIQFVKLADYSRKITLF
TSTFGVLGVLVAVFFVKSLDTSMLQWLVIIVLLYSAISMALSLRQKGEA

Sequences:

>Translated_289_residues
MIKILLGLIVLINLGFVFYFIRDLLRHRSDVMSEPATTWALPFSSFIIFLLSTFGISDFAISTALYPKAKWVSIKKLPGT
LNTQCVVPVAAMALSYITAITVDIKTLAVCIIAAVIGAYIGPRFVVKLPANTIKKFVTAGLIIAALMILAGKFNWIPANG
TATSLSGWKLMLTAILLFIYGALNNIGIGSYALTMATVYAMGLNPSAAFPIMMGAATFSVSTSSIQFVKLADYSRKITLF
TSTFGVLGVLVAVFFVKSLDTSMLQWLVIIVLLYSAISMALSLRQKGEA
>Mature_289_residues
MIKILLGLIVLINLGFVFYFIRDLLRHRSDVMSEPATTWALPFSSFIIFLLSTFGISDFAISTALYPKAKWVSIKKLPGT
LNTQCVVPVAAMALSYITAITVDIKTLAVCIIAAVIGAYIGPRFVVKLPANTIKKFVTAGLIIAALMILAGKFNWIPANG
TATSLSGWKLMLTAILLFIYGALNNIGIGSYALTMATVYAMGLNPSAAFPIMMGAATFSVSTSSIQFVKLADYSRKITLF
TSTFGVLGVLVAVFFVKSLDTSMLQWLVIIVLLYSAISMALSLRQKGEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31165; Mature: 31165

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKILLGLIVLINLGFVFYFIRDLLRHRSDVMSEPATTWALPFSSFIIFLLSTFGISDFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHH
ISTALYPKAKWVSIKKLPGTLNTQCVVPVAAMALSYITAITVDIKTLAVCIIAAVIGAYI
HHHHHCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPRFVVKLPANTIKKFVTAGLIIAALMILAGKFNWIPANGTATSLSGWKLMLTAILLFIY
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
GALNNIGIGSYALTMATVYAMGLNPSAAFPIMMGAATFSVSTSSIQFVKLADYSRKITLF
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCEEEEEECCCCCEEEEE
TSTFGVLGVLVAVFFVKSLDTSMLQWLVIIVLLYSAISMALSLRQKGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKILLGLIVLINLGFVFYFIRDLLRHRSDVMSEPATTWALPFSSFIIFLLSTFGISDFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHH
ISTALYPKAKWVSIKKLPGTLNTQCVVPVAAMALSYITAITVDIKTLAVCIIAAVIGAYI
HHHHHCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPRFVVKLPANTIKKFVTAGLIIAALMILAGKFNWIPANGTATSLSGWKLMLTAILLFIY
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
GALNNIGIGSYALTMATVYAMGLNPSAAFPIMMGAATFSVSTSSIQFVKLADYSRKITLF
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCEEEEEECCCCCEEEEE
TSTFGVLGVLVAVFFVKSLDTSMLQWLVIIVLLYSAISMALSLRQKGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA